| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2937 |
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| Symbol | |
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| ID | 4174705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3560531 |
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| End bp | 3561286 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638055960 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_662499 |
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| Protein GI | 109899244 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0022329 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAC GCATTCTTGC GCTTACTCTG ACAGCGATAT TTGGAGCCGC AGTAAATGCG
GCTCCTGCGC CTGTAGCGGA TGTAAGCAGT GGCAGTACAG AGTCACGTCT AACCACCTTA
GAGCGCCTTT TTAATACACG TACAGCGCAG CAACATCGCG TTCAGGAGCA GCTGGATTTG
CTTCAGAATG AAGTGAATGA GTTACGTGGC AGTATTGAGA AGCATAATTA TCAACTAGAG
CGGATATTAG AGCGTCAACG AGAGCTGTAT TTAGAGATTG ATAAACGCAT TGCTGCTGTG
ATGACGCAAA ATGGCAGTGG AGCCACTGAC GAGTTTAATC AGACTAATCA AGTTAGCCAA
CCTAGCTCTC AAACTAGCCT GAATGAAGAT CAAGCGTATG ATAAAGCTGT CAACCTTATC
TTAAAAGACA AGCTGTATGA TGATGCTATT CCTGAGTTCC AATCCTTCTT GCAAAACTTC
CCTAATTCAA GTTATGCCTC AAATGCGCAT TACTGGTTAG GGCAATTGTT ATTTAATAAA
CAAGATTGGG CGGCAGCGGC AAATCAGTTT GAAACATTGA TGAATCAATT TCCGGATTCT
TCGAAGCGCG CAGATGCCAT GTTGAAATTA GGTATTTGTG AGCAAGAGCG TTCAAATATT
GCCCGAGCAG AACAATTATG GAAAAAAGTG TTAACGGAAT ACCCGACTTC TTCAGCAAGG
AAACTGGCTG AAATTAAATT AAATGCCGTT AAATAG
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| Protein sequence | MNKRILALTL TAIFGAAVNA APAPVADVSS GSTESRLTTL ERLFNTRTAQ QHRVQEQLDL
LQNEVNELRG SIEKHNYQLE RILERQRELY LEIDKRIAAV MTQNGSGATD EFNQTNQVSQ
PSSQTSLNED QAYDKAVNLI LKDKLYDDAI PEFQSFLQNF PNSSYASNAH YWLGQLLFNK
QDWAAAANQF ETLMNQFPDS SKRADAMLKL GICEQERSNI ARAEQLWKKV LTEYPTSSAR
KLAEIKLNAV K
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