Gene Patl_2931 details

Gene Information

• Locus tag: Patl_2931
• ID: 4174697
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 3553169
• End bp: 3553708
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638055952
• Product: hypothetical protein
• Protein accession: YP_662493
• Protein GI: 109899238

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00911801
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGAAAA AAATGGCAAT TGGGATCGCT GCAATACTGA TGTTTTTTGT GGTGGTCGGA 
TGGTTGTTAC CATCCGAATT TAAAGTGGTT AGAACCATCA GAATTGAAGC TCCTGCAGAT 
ATTATTTTTA AACATGTGAA AGATTTAAAG AAGTGGCAGC ATTGGGGAGT CTGGTTTGAA 
CGCGACCCTG ATATGCAAGT GGCTTACGCA GGCCCTGATT CCTCAGTTGG TATGAAATCT 
ACTTGGCAAA GTGAAAGCCA AGGTAATGGC GAAATGGAGA TTGTGGCCAT AGAAGAAAAC 
CAGCGATTCA TATATACCCT TGTTTTTCCT GATATGGGAG TTGGCTCAAC CGGTGAGCTA 
ACCTTACGAG ATAAAGAGGG AGAAACGGTC GTTATTTGGC ACGATTATGG CGACGTTGGG 
GCTAATCCGT TGTTACACTA TGTGGCGTTT TTTATGGACC GAATGATCGG TGAAGACCTA 
CAAATGGGCT TAGAGAACCT TAAAGTTATT GCAGAGGCTG AGTTTCAACA AACGCGGTGA 

 

Protein sequence

MLKKMAIGIA AILMFFVVVG WLLPSEFKVV RTIRIEAPAD IIFKHVKDLK KWQHWGVWFE 
RDPDMQVAYA GPDSSVGMKS TWQSESQGNG EMEIVAIEEN QRFIYTLVFP DMGVGSTGEL 
TLRDKEGETV VIWHDYGDVG ANPLLHYVAF FMDRMIGEDL QMGLENLKVI AEAEFQQTR