| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2917 |
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| Symbol | |
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| ID | 4174676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3533979 |
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| End bp | 3534986 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055931 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_662479 |
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| Protein GI | 109899224 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.154407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCACAGCG CAAATTTCTA TCCGGAAGGC AGTTCACGCT GCCTGCTCGT TTCCTTGAAT
TTCACCAAAG ATCATCTCGT TATTAGCAAC GAAGATAACG AAGTTCTCCA CACTATTTTT
AAGCGCGAGT TGATTGTCGC GTCGAAACTC GCGTCCACAA ATCGGGAAGT ATCAATCCCT
GATGTTGGGC AGTTAGTCAT CCCTTCTTCC AATGAGATTG ATGAGCTCAT CTACCCAACG
AATAAATTGC AATGGGCAGC CAAACTCGAA AGTAGTTACA AAGCAATTAT CATCAGTTTG
ATATTAATGC CCTTTAGCCT GTTTTTGATA TTTAAATATG GCATTCCTTA CGCCGCACAG
CAATTCGCGA CAATCATTCC TGATAGTGCA GTGGAGTTAG CTTCAACCCA TACATTGCAT
GCTATGGACA GTAGCGTTCT AAAGCCAAGC AAGCTGAGCC AAAACGAACA AGAGGCTTTT
AGGACTCAGT GGGAAGAGCA ACTCAATCAA CTGCGGTTAA ACAGCAATGC CTACTCCTTG
CAATTTAGAG ACAGTGAAAC ACTCGGGGCC AATGCGTTTG CTTTTCCAAA CGGATCGATT
GTTGTTACTG ATCAATTTAT GGACTTGATA GAAGAAAACC CGTCATTACT GCACGCGGTG
TTACTGCACG AAATAGGGCA TGTTGAGCAG CATCATTCAA TGCGACTCAT CTCCCAGACG
CTATTTTCCT CCCTTGTCAT TGATTACTTT TTCGCTGATG TCAGTGGATT AATCGATATC
TTTGCCGGTG TATCCACCAC ACTAGTTCAA AACCAGTTTT CATCTCAGTT AGAATGGGAA
GCAGATAACT TTGCGTTACA AACAATGAAA AGTGCAAATA TAAGCACTGA GGCCTTCGCT
CTAGCCCTTG AGAAATTAGC ACAAACCTCG CCAGAACAGT CAAAAATGGA TAAATGGTTG
CAAACCCATC CATTGTTGAG AGAACGCATA GCCAATGCGA GAAAGTGA
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| Protein sequence | MHSANFYPEG SSRCLLVSLN FTKDHLVISN EDNEVLHTIF KRELIVASKL ASTNREVSIP
DVGQLVIPSS NEIDELIYPT NKLQWAAKLE SSYKAIIISL ILMPFSLFLI FKYGIPYAAQ
QFATIIPDSA VELASTHTLH AMDSSVLKPS KLSQNEQEAF RTQWEEQLNQ LRLNSNAYSL
QFRDSETLGA NAFAFPNGSI VVTDQFMDLI EENPSLLHAV LLHEIGHVEQ HHSMRLISQT
LFSSLVIDYF FADVSGLIDI FAGVSTTLVQ NQFSSQLEWE ADNFALQTMK SANISTEAFA
LALEKLAQTS PEQSKMDKWL QTHPLLRERI ANARK
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