| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2912 |
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| Symbol | |
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| ID | 4174671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3526973 |
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| End bp | 3529501 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055926 |
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| Product | hypothetical protein |
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| Protein accession | YP_662474 |
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| Protein GI | 109899219 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAGC AAACTTTTAA TTTAGCTTGG CGTTTATTCA AACATGAGGC AAAGCGCGGT
GAACTCACAA TTATTTTGTT GGCCATTATT TTGTCTGTGG CGTCAGTGTT GTCGCTATCG
CTCTTCAGTG AGCGATTACA ATCAGCCCTG ACAGATAAAA GTGCTGAGTT TATCGCCGCG
GACAGAGTGC TGAATTCGCG CAAGCCGGTG GATGAGGCCT GGATCGAGAA AGCCAAAGAG
TTTGGACTAA ATACTGCGAA TCAAGTCTAT ACGCGCTCTA TGGCATTCTC TGGCGACAAC
ATGATGTTGG TTGATTTGAG GGCGGCCGCG CAAGGTTATC CTTTGAAAGG CACAGTCAAA
ATTGCTGAGC AACCGTTCGC TCCCGGGCAG GCAACAGACA CCTTGCCACA ACCTGGAAAT
GCGTGGGTTG AGTCCCGTTT ATTTCAAAAT TTAGGGTTGA GCTTAGGGCA GGTAATTGAA
GTAGGTGACA AAGCATTCAC CGTCAGCAAG GTTTTATCAG AAGTGCCTGA TGCGGGTTTC
AGCGTGTTTG GCGGCGATCC AAAGGTGTTG ATAAGCGAGC AAGATTTAGC TGCAACGAAC
ATTATTGGTC CTGGTAGTCG TGCCTCTTTC AGTTACTTCT TTACGGGCAG TGATGCGGAT
TTAAATGATT ATTACGACTG GCTGTTGCCG CAATTAGATA AAGAGCTACA AAGCTGGGTG
TCAGTCAGCG ACGATGACTC AGCAATCGGC CGCTCTATCG CCAAGGCAGA GCAATACTTT
TTATTGGCTA GTTTGTTAGC TATCGTTTTA GCAGCCGTTT CAATTGCGGT AGCGGCGCAA
AGATACAGTC AACGCCACTA TGATCCTGTT GCGATCATGA AGACATTAGG CGCTAGTAAA
AAAATGGTGC AGCAAGTGTA TTTGCTACAA ATCACTTTCA TTACTGTATT GGGGATTGCG
ATCGGTACAG TGCTGGGCTT TTTGATCCAA CAAGTTGTGG TCTTGGCGCT AGCTGGCAGC
GTAGATGTGT CACTTGACGT GTGGTTTTGG CGACCACTGA TTATCGCTGT TTTTACTGGT
GCTATCTGCG CAGTGCTATT TTCACTTTAT CCTCTCCTTA AACTCTTCTC GGTTTCACCG
CTGCGGGTTT TGCGGCGTGA CTTGGGGGCA TCATTAAGTT CACGCTTCAT TCAATTTTTA
GCATCAGGGG GGGCTATTTT CAGTTTGATG TGGGCGTACA GTGGTAATTT GGGCTTAAGC
GCTATTTTGT TCGGCTCAGG TATTTTACTG GTGATGAGTT TACTGCTTGT CACCTTCGGT
TTGATTTGGC TTGGCCGCAG GCTTGGCAGT GGTAAAATGG GAGCATGGCA ACTTGCATGG
GCACGTATAC GTCGCAGGGC CATGGATAAT GCTGTTCAGC TTATTAGTTT TGCTGTAACC
ATCATGCTGT TATTGATTGT GTTGGTCATG CGCAACGACA TGATAGCCCA GTGGCAAAAT
CAGCTTCCCC AAGGCACGCC GAATTACTTC CTCGTGAATA TTACACAACA GCAGCTACCT
GACTTACAGG CGCATTTTGC GCAAGAAAAT GTCGATATTG AACATTTTTA CCCGGTGGTA
CGTGGTCGAT TTGTGGCTAT TAATGATGAA AAGGTTTCAA CAGCAGTCAG CAAAGAAGAT
GAAGAGCCTG GTGAGCGTCA GGGGCGCGAG GGGTTAGGGC GAGAAGCGAA CCTGACATGG
AGTGATGAAT TACAGCATGA GAATGTGATC ACTGCTGGTA AATGGTTTGA CTCTAGTGAG
CCTCTTGAAA GTGGTTTGTA CGGGGTATCT GTTGAAGCGC GAATTGCTGA TAGGCTTGAT
ATTCAATTAG GTGACAAACT AACCTTTAAT GTCGGCAGTG AAATCATTAA TACACAAGTA
TCCAGTTTAC GTGAAGTGAA TTGGCAAACT ATGCAGCCAA ACTTCTTTTT TGTTATTCAG
CCGCAGGCGA TGGAAGGGTA TTTGCCGACG TATTTATCCA GCTTTTACTT AGACAAGTCG
AGAAAATCAG ATATCACAGA TTTGATGAAG CCTTTTGCCA GTGTCACCTT ATTTGACGTT
GATGCCCGCA TAGAGCAACT TCGCGGCATC GTGCAACAGG TATCATTAGC GGTTGAGTTT
ATATTGGTGC TTGTGCTTGC TGCAGGTGCA TTAGTACTAA TTGCACAGGT GCAAGCCAGT
ATGGACGAGC GACAGCAAGA GCTAGCCATC TTACGTACCT TGGGGGCGAA AGGGCGTTTG
ATACGAGCCA GTGTGTTGTT CGAATTTATT ATTATTGGTT TGGTTGCGGG GCTAATGGCT
GCCTTTGCCA ATGAAGTCAG CCTGTTCTTT TTACAAAGCC GAGTGTTTGA AATGGAAGCC
ATGTTGCATT GGGAGTACTG GTTTATTGCT CCTGTTGTGG GTGCTATCGT CGTAGGGGCT
TTAGGTATGG TTGGTTGCTG GCGTTTGCTG CGCTTAAATA CCAGCCATCT CCTGCGTCAA
ATGGTGTGA
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| Protein sequence | MTKQTFNLAW RLFKHEAKRG ELTIILLAII LSVASVLSLS LFSERLQSAL TDKSAEFIAA
DRVLNSRKPV DEAWIEKAKE FGLNTANQVY TRSMAFSGDN MMLVDLRAAA QGYPLKGTVK
IAEQPFAPGQ ATDTLPQPGN AWVESRLFQN LGLSLGQVIE VGDKAFTVSK VLSEVPDAGF
SVFGGDPKVL ISEQDLAATN IIGPGSRASF SYFFTGSDAD LNDYYDWLLP QLDKELQSWV
SVSDDDSAIG RSIAKAEQYF LLASLLAIVL AAVSIAVAAQ RYSQRHYDPV AIMKTLGASK
KMVQQVYLLQ ITFITVLGIA IGTVLGFLIQ QVVVLALAGS VDVSLDVWFW RPLIIAVFTG
AICAVLFSLY PLLKLFSVSP LRVLRRDLGA SLSSRFIQFL ASGGAIFSLM WAYSGNLGLS
AILFGSGILL VMSLLLVTFG LIWLGRRLGS GKMGAWQLAW ARIRRRAMDN AVQLISFAVT
IMLLLIVLVM RNDMIAQWQN QLPQGTPNYF LVNITQQQLP DLQAHFAQEN VDIEHFYPVV
RGRFVAINDE KVSTAVSKED EEPGERQGRE GLGREANLTW SDELQHENVI TAGKWFDSSE
PLESGLYGVS VEARIADRLD IQLGDKLTFN VGSEIINTQV SSLREVNWQT MQPNFFFVIQ
PQAMEGYLPT YLSSFYLDKS RKSDITDLMK PFASVTLFDV DARIEQLRGI VQQVSLAVEF
ILVLVLAAGA LVLIAQVQAS MDERQQELAI LRTLGAKGRL IRASVLFEFI IIGLVAGLMA
AFANEVSLFF LQSRVFEMEA MLHWEYWFIA PVVGAIVVGA LGMVGCWRLL RLNTSHLLRQ
MV
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