Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2891 |
Symbol | |
ID | 4174650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3502701 |
End bp | 3503165 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055905 |
Product | heat shock protein Hsp20 |
Protein accession | YP_662453 |
Protein GI | 109899198 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.457656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAATA TCGATCTATC TCCACTATAC CGTTCTTTCA TTGGTTTTGA CCACTTGGCA TCAATGATTG ACACTGCATC TCGTAATGAA AAACAATCTA GCTACCCTCC CTACAACATT GAGTTGATAG CCGAAGATAA ATATCGCATC ACCATGGCGG TTGCGGGTTT CGCAGAAAAT GAAGTCTCGA TTGAGGTGCA AGAAAACACC TTGAAAGTCA CCGGCAATAA AGCCGCAGCA ACAGACGAAG AGCGAAAATT CCTTCACAAG GGTATTTCAG AGCGCAACTT TGAACGCAAA TTCCAATTGG GCGATCACGT AAATGTGCTC GACGCCAAAA TGGAAAACGG CCTACTCCAC GTTAATTTAG AGCGTGTGGT ACCCGAAGCG AAAAAACCAC GCACGATTCA AATTGGTAGT CATACTGAGA AGTTGATTGA GGGTGAAAGC AAACCCGCGA GTTAA
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Protein sequence | MRNIDLSPLY RSFIGFDHLA SMIDTASRNE KQSSYPPYNI ELIAEDKYRI TMAVAGFAEN EVSIEVQENT LKVTGNKAAA TDEERKFLHK GISERNFERK FQLGDHVNVL DAKMENGLLH VNLERVVPEA KKPRTIQIGS HTEKLIEGES KPAS
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