Gene Patl_2891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2891 
Symbol 
ID4174650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3502701 
End bp3503165 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content44% 
IMG OID638055905 
Productheat shock protein Hsp20 
Protein accessionYP_662453 
Protein GI109899198 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.457656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAATA TCGATCTATC TCCACTATAC CGTTCTTTCA TTGGTTTTGA CCACTTGGCA 
TCAATGATTG ACACTGCATC TCGTAATGAA AAACAATCTA GCTACCCTCC CTACAACATT
GAGTTGATAG CCGAAGATAA ATATCGCATC ACCATGGCGG TTGCGGGTTT CGCAGAAAAT
GAAGTCTCGA TTGAGGTGCA AGAAAACACC TTGAAAGTCA CCGGCAATAA AGCCGCAGCA
ACAGACGAAG AGCGAAAATT CCTTCACAAG GGTATTTCAG AGCGCAACTT TGAACGCAAA
TTCCAATTGG GCGATCACGT AAATGTGCTC GACGCCAAAA TGGAAAACGG CCTACTCCAC
GTTAATTTAG AGCGTGTGGT ACCCGAAGCG AAAAAACCAC GCACGATTCA AATTGGTAGT
CATACTGAGA AGTTGATTGA GGGTGAAAGC AAACCCGCGA GTTAA
 
Protein sequence
MRNIDLSPLY RSFIGFDHLA SMIDTASRNE KQSSYPPYNI ELIAEDKYRI TMAVAGFAEN 
EVSIEVQENT LKVTGNKAAA TDEERKFLHK GISERNFERK FQLGDHVNVL DAKMENGLLH
VNLERVVPEA KKPRTIQIGS HTEKLIEGES KPAS