Gene Patl_2884 details

Gene Information

• Locus tag: Patl_2884
• Symbol: hisH
• ID: 4174643
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 3496838
• End bp: 3497467
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638055898
• Product: imidazole glycerol phosphate synthase subunit HisH
• Protein accession: YP_662446
• Protein GI: 109899191
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTACGT CAGCACCTTT AGTTAACAGC AAACAGAACA TTGTTATTGT GAACACCGGT 
TGCGCAAATA TTTCATCGGT AAAATTTGCC GTTGAACGCT TAGGGGTAAA AGTGGATGTG 
TCTGATGATG TTCAGGTCAT TCAAAAAGCC GATAAAGTGT TTTTGCCCGG CGTAGGCAGT 
GCCAACGCCG CTATGGCCAG CATTGAGGTT AAACAACTAA AATCCTGTAT TCAGGGCCTA 
ACGCAACCGG TATTAGGCAT TTGCCTAGGC ATGCAACTCA TGGTTGAACG CTCTGAAGAA 
AGCCTAGTGG ATAGCACCCC ATGTTTAGGT ATGATCCCCG GTGAGGTAAA ACGCATGCAG 
GTGGGTGATT TACGTTTACC GCATATGGGC TGGAACACCG TGAACCCTGT TGAGCAAAAC 
ACCTTATTCA AAGGCATCGA TGCTGGCAGT TACTTTTACT TTGTACATAG CTTTGCCGTT 
GCTGTGAGTG AATATACCCT CGCGCAAACC GACTATGGCA TGCCGTTTTC AGCTGCGCTG 
CACAAAGACA ATTTTTTCGG GGTGCAATTT CACCCTGAAC GTTCTAGTGA TGCGGGCGCC 
GCCCTTCTTA AAAACTTTAT CGAGTTATAA 

 

Protein sequence

MSTSAPLVNS KQNIVIVNTG CANISSVKFA VERLGVKVDV SDDVQVIQKA DKVFLPGVGS 
ANAAMASIEV KQLKSCIQGL TQPVLGICLG MQLMVERSEE SLVDSTPCLG MIPGEVKRMQ 
VGDLRLPHMG WNTVNPVEQN TLFKGIDAGS YFYFVHSFAV AVSEYTLAQT DYGMPFSAAL 
HKDNFFGVQF HPERSSDAGA ALLKNFIEL