| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2882 |
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| Symbol | |
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| ID | 4174641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3494645 |
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| End bp | 3495760 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055896 |
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| Product | histidinol-phosphate aminotransferase |
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| Protein accession | YP_662444 |
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| Protein GI | 109899189 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAGC CCGTGAATAA TCTTATCGAC TTGCTGTTAA ACGACAACAT TAAAGGATTA
AAACCATATG AGTCAGCGCG GCGCTTGTTC TCAGGTGCAG GTAACAAACA GCAAGTCTGG
CTAAACGCGA ACGAATCGCC GTTCGCCAAT GATTTTACTA TCGATGCCGA GCGTTTTAAT
CGCTACCCTG ATTGCCAGCC CCCAGCGGTT ATTGATGCCT ACGCCGCCTA CGCCGGTGTT
CAGCCCGAGC AGTTACTGGT TAGCCGAGGT GCGGACGAAG GCATTGAATT ACTCATTCGC
GCTTTTTGTA CACCAGGCAA AGACAGCGTG CTTATTTGCC CGCCGACCTA CGGCATGTAT
GCCATCAGTG CAGAAACCTG TGATGTGGGT ATTGAACGCG CTGGGTTAAA TGATGACTTT
TCATTAAACG TTGATGCCAT CAAGGCCTTT AAAGGCAAAG TGAATCTGGT ATTTATTTGC
TCGCCAAATA ACCCCACCGG CACCAGTGTT GACAAGAACC AGCTATTAGA GGTGGTTGAA
CACTTTGCCG ACAGCGCCAT CGTGGTCATT GATGAAGCCT ATATCGAGTT TGATAAAGAC
AACAGTTGGG CAGCTGAGCT CACTCATTAC CCGAACATTG CTATTTTACG CACTCTGTCC
AAAGCCTTCG CTTTAGCCGG TTTGCGTTGC GGTTTCACGT TAGCCCAAGC GCCTGTTATA
CAAGCATTAA TGAAGGTCAT TGCGCCCTAC CCGATTCCAG AGCCTGTGGC GCAAATTGCC
GCTCAAGCGC TTAGTAGCGA GGGGCTGGTG ACACTTGAAC AACAAGTTGC CGTGATCAAT
CAAGAAAAAG CCCTGCTTAA AAGCGCGCTG GCTGAAATTG CAGACGTTGA GCTGGTCGGT
GACGATAAAG CCAACTTTAT TCTTTTTCGC ACACCCCAAA AGTCTGCATT AATGAGTCAC
TTGGTTGCCA GCGGAATCTT AATACGTGAC CAATCGAAAC AAATTAACCT GGATAATTGC
TTGCGCATCA CCGTGGGCAG CCCAGAACAG AATAAACAAT TGCTGAGCGA GATCAGTCGT
TTTTTCACCC TTCAAACTTC TACGCAGGAG GCCTAA
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| Protein sequence | MAEPVNNLID LLLNDNIKGL KPYESARRLF SGAGNKQQVW LNANESPFAN DFTIDAERFN
RYPDCQPPAV IDAYAAYAGV QPEQLLVSRG ADEGIELLIR AFCTPGKDSV LICPPTYGMY
AISAETCDVG IERAGLNDDF SLNVDAIKAF KGKVNLVFIC SPNNPTGTSV DKNQLLEVVE
HFADSAIVVI DEAYIEFDKD NSWAAELTHY PNIAILRTLS KAFALAGLRC GFTLAQAPVI
QALMKVIAPY PIPEPVAQIA AQALSSEGLV TLEQQVAVIN QEKALLKSAL AEIADVELVG
DDKANFILFR TPQKSALMSH LVASGILIRD QSKQINLDNC LRITVGSPEQ NKQLLSEISR
FFTLQTSTQE A
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