Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2861 |
Symbol | |
ID | 4174620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3469829 |
End bp | 3471916 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638055875 |
Product | glycoside hydrolase family protein |
Protein accession | YP_662423 |
Protein GI | 109899168 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATAA CTACGTCTGT GTTTGATGTT ACTGCCCCGA ATTGGAACGA TATAAAGCAA GCTGAAGTGA CCGGCGCCGC GAGCTTGCAA AGTGATGCCA GTGTACTAAT TCCGACGTCG CAAGGTGAGT TACACATCGC ATTTCATACG TTTGGTGTGC GTGTACAAAT TGGCACGAAA AATCAGCCTG ACTATGGCCT ACTCGTATCC ACGCCGGATG TAATAGCGGC AGATATCGTT TCAAATGAGC AGCAAACAAC CCTGATTGCT GGTGAGAGTA AGTTGGTGAT CAACCACACC CCCTTCACGT TTGAGTTATC ACAAAACAGT AAAACAATTC AGCAAACTGC GACCGATGGT CACTTTGTGC GTCGCTACCG TTTACCGCCT CTAGCCAAAG TGGATAAAGG CTGGTTAATA AGCCTAGAGC TTGGCACCGA CGAAGCCGTA TACGGCTTAG GCGAAAAATG GGGTAGCCTT AATAAGCGCG GTCAACTGGT GCGCTCTTAC AACCACGATG CGCTAGGCGT AAATGCAGAA ATTTCCTACA AAAACACGCC ATTTTGTTGG AGCCCCAGCG GTTGGGGCGT GTTTGTGCAT ACCCCTGCCC CGGTAACACA TGCTGTGGGT TATGCCACTT GGTCACAACG TGCTTATGGG GTATTGGTGG AAGATGAATG CTTAGATTTG TTCTTGATGC ACGGTGAGGA TGGTAATGCC ATTATCAACA CCTACACAGA TTTAACCGGC AAAGCGCCGA CCCCTCCGGT ATGGAGCTTA GGGGTTATTT TATCGAAAGC GTATTACAAA GATGTGCCTG AATTATTGGC TACGGCAAAA GACGTACGCG ATCACAAAAT GCCGTGCGAC GTTATCACCC TTGACGGACG TGCATGGCAA GACACAGATA CCCGCTTTGC CTTTGAATGG GATCCCAAAC GCTTTGACGA CCCCGCGGCG GTGATCAATA AGCTCAAAGC AGACAACTTT AAAGTCTGCA TATGGGAATA TCCATTGGTT TCTATTCAGC ATCCGCTTTT CGCCGAAATG GCCAAAAAAG GCTGGTTATT AAAAGACAAG CGCACCGGCG AAGCGTATCA ATACAAGTGG GACATGAGCG CGTTTGCAGA AGTGCTGACG CCGCTACCTG AGTCCGGCAT TGTGGATTTC ACCCACCCCG ATGCATATCA GTTTTGGATG GAATCACACA AGCCCTTGTT TGATTTAGGC ATTGATATGA TAAAAGCCGA CTTCGGTGAA CAGGTCGAAG ATGACAACAT GCTTGCTTAC AGCGGTGATT CAGGCAACCG CTTGCACAAC ATTTACAGCT TTCTATACAA CAAGTGCGTG TACGAAGCCG CAGAGAAGTA TTCTAAAAAC GGCCCTTTCT TGTTCAGCCG TTCAGCATGG ACCGGCTCAC AGCGCTTCCC TAGTCAATGG GGCGGCGACC CACAAGCCGA TTGGGGCGGG CTAAGCGCCA GTATCCGCGG TGCTTTGTCG TGGGGGATGT CAGGCGCGCC TTTCTTTGCC ACTGATATTG GCGGGTTCTT CAAAGACACA CGAGATCAAG AGCTCTTTAT TCGTTGGTCA CAAGCCGCCG TATTCAGTGC TCATATGCGT TTACACGGCA TAGGTCAGCG TGAACCTTGG AGCTATGGCC CGGAAGCAGA AGATGCAGTA AACCAAGCAT TGGTGCTACG TTATCGCTTA CTACCGTATA TTTACAACGC CATGCAACAA GCAAGTAGTA CAAGTGTTCC TTTGATGCGC GCGATGCCAT TGGCCTTTCC CAAAGATCGT GTAGCGGCAG CGTTTGAATC GCAGTTTATG TTCGGTGATG ACATGTTAGT GGCTCCCTGC TTAAAACCCG GCGGAGAAGT AGAGTTCTAC TTACCCGAAG GTGAATGGCA ACGCTTCCCA AGTGAACAAA CCTACCAAGG TGGCAAGGTT TATAACCTAA CCCTTGGCGC TCAAGAAATG GCCGTGTTCG TACCTAAGGG CAAGCGCATA CCACTTGGGC CAGATGTTGA ACACACGGAC GAGTTGACTG ATCAGCAACC GCAAATTAGC CATTACTGGC CCAAATAG
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Protein sequence | MSITTSVFDV TAPNWNDIKQ AEVTGAASLQ SDASVLIPTS QGELHIAFHT FGVRVQIGTK NQPDYGLLVS TPDVIAADIV SNEQQTTLIA GESKLVINHT PFTFELSQNS KTIQQTATDG HFVRRYRLPP LAKVDKGWLI SLELGTDEAV YGLGEKWGSL NKRGQLVRSY NHDALGVNAE ISYKNTPFCW SPSGWGVFVH TPAPVTHAVG YATWSQRAYG VLVEDECLDL FLMHGEDGNA IINTYTDLTG KAPTPPVWSL GVILSKAYYK DVPELLATAK DVRDHKMPCD VITLDGRAWQ DTDTRFAFEW DPKRFDDPAA VINKLKADNF KVCIWEYPLV SIQHPLFAEM AKKGWLLKDK RTGEAYQYKW DMSAFAEVLT PLPESGIVDF THPDAYQFWM ESHKPLFDLG IDMIKADFGE QVEDDNMLAY SGDSGNRLHN IYSFLYNKCV YEAAEKYSKN GPFLFSRSAW TGSQRFPSQW GGDPQADWGG LSASIRGALS WGMSGAPFFA TDIGGFFKDT RDQELFIRWS QAAVFSAHMR LHGIGQREPW SYGPEAEDAV NQALVLRYRL LPYIYNAMQQ ASSTSVPLMR AMPLAFPKDR VAAAFESQFM FGDDMLVAPC LKPGGEVEFY LPEGEWQRFP SEQTYQGGKV YNLTLGAQEM AVFVPKGKRI PLGPDVEHTD ELTDQQPQIS HYWPK
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