Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2860 |
Symbol | |
ID | 4174619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3468730 |
End bp | 3469479 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638055874 |
Product | GntR family transcriptional regulator |
Protein accession | YP_662422 |
Protein GI | 109899167 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.747318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGAAA ATCGCTTTGA CAACAAACTT AGCCGACCTG GTTTAGCTTT CCAACCTTTG TACAAACAGG TGGAAGAGCA AGTGACCCAA CTTATCGTTG AGCAGCGCTG GAAGCCAGGT GAAATGTTAC CCAACGAATT TCAGCTGGCC AGCGAGTTTG GCGTCAGCCA AGGCACGGTG CGTAAAGCGC TGAACAGCCT AACGAGCGCT AAAATTCTTA CCCGCAGGCA AGGCATTGGT ACGTTTGTTT CTGAGCATAC GGGGCATCAC GGACTTTATC GTTTTTACCC CCTGATTGCG GATGGTAAAA ACCCAGAATT GCCCAAGGCT GAGCTATTGT CTATCTCAAC GCAAACAGCC AATAAGAAAG TCGCTGCGGC CTTAGCACTC AACCCGAAAG ACAAAGTGAT TGTACTGATC AGGCGCCGTA TTTTAGATAA CGAGTTTTGC ATTGCTGAGA CTATTTTTTT GCCCCATAAA TGGTTCAAAG CATTGCTTGA TGAAAAAGAA GTGCCACATA CGCTGTACCA CTTTTATCAA ACCAACTTTA ACCTGACCGT ACATACCATT CGTGACAGTA TCAAAGCGGA TCTCGCCACG CAAAATGACG TTGATACACT AGACATAAAA CTAGGTGAGC CGTTGCTTGA AGTAACACGC ATCGCTCAGT CGCTAAACGA CAAACCGATG GAATACCGCA TCAGTCGTTG CCGCAGTGAC AAATACCATT ATCTGGTGGA ATTAAACTAA
|
Protein sequence | MNENRFDNKL SRPGLAFQPL YKQVEEQVTQ LIVEQRWKPG EMLPNEFQLA SEFGVSQGTV RKALNSLTSA KILTRRQGIG TFVSEHTGHH GLYRFYPLIA DGKNPELPKA ELLSISTQTA NKKVAAALAL NPKDKVIVLI RRRILDNEFC IAETIFLPHK WFKALLDEKE VPHTLYHFYQ TNFNLTVHTI RDSIKADLAT QNDVDTLDIK LGEPLLEVTR IAQSLNDKPM EYRISRCRSD KYHYLVELN
|
| |