Gene Patl_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2860 
Symbol 
ID4174619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3468730 
End bp3469479 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content46% 
IMG OID638055874 
ProductGntR family transcriptional regulator 
Protein accessionYP_662422 
Protein GI109899167 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.747318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAA ATCGCTTTGA CAACAAACTT AGCCGACCTG GTTTAGCTTT CCAACCTTTG 
TACAAACAGG TGGAAGAGCA AGTGACCCAA CTTATCGTTG AGCAGCGCTG GAAGCCAGGT
GAAATGTTAC CCAACGAATT TCAGCTGGCC AGCGAGTTTG GCGTCAGCCA AGGCACGGTG
CGTAAAGCGC TGAACAGCCT AACGAGCGCT AAAATTCTTA CCCGCAGGCA AGGCATTGGT
ACGTTTGTTT CTGAGCATAC GGGGCATCAC GGACTTTATC GTTTTTACCC CCTGATTGCG
GATGGTAAAA ACCCAGAATT GCCCAAGGCT GAGCTATTGT CTATCTCAAC GCAAACAGCC
AATAAGAAAG TCGCTGCGGC CTTAGCACTC AACCCGAAAG ACAAAGTGAT TGTACTGATC
AGGCGCCGTA TTTTAGATAA CGAGTTTTGC ATTGCTGAGA CTATTTTTTT GCCCCATAAA
TGGTTCAAAG CATTGCTTGA TGAAAAAGAA GTGCCACATA CGCTGTACCA CTTTTATCAA
ACCAACTTTA ACCTGACCGT ACATACCATT CGTGACAGTA TCAAAGCGGA TCTCGCCACG
CAAAATGACG TTGATACACT AGACATAAAA CTAGGTGAGC CGTTGCTTGA AGTAACACGC
ATCGCTCAGT CGCTAAACGA CAAACCGATG GAATACCGCA TCAGTCGTTG CCGCAGTGAC
AAATACCATT ATCTGGTGGA ATTAAACTAA
 
Protein sequence
MNENRFDNKL SRPGLAFQPL YKQVEEQVTQ LIVEQRWKPG EMLPNEFQLA SEFGVSQGTV 
RKALNSLTSA KILTRRQGIG TFVSEHTGHH GLYRFYPLIA DGKNPELPKA ELLSISTQTA
NKKVAAALAL NPKDKVIVLI RRRILDNEFC IAETIFLPHK WFKALLDEKE VPHTLYHFYQ
TNFNLTVHTI RDSIKADLAT QNDVDTLDIK LGEPLLEVTR IAQSLNDKPM EYRISRCRSD
KYHYLVELN