Gene Patl_2858 details

Gene Information

• Locus tag: Patl_2858
• ID: 4174617
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 3464503
• End bp: 3466470
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 638055872
• Product: hypothetical protein
• Protein accession: YP_662420
• Protein GI: 109899165
• TIGRFAM ID: [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.231255
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAGCAAT CAGCGTTAAA AGTACTCGCA GGGCCTATTC TAAAGAAACT CACGTGCGAG 
CAAGTGACTT TATGGTTAGT CACCAACCAA CCCATCGATA TCAATTTGTC GCTTTCACCT 
GAAGGTCAAA CTGCGCAAAC CTACCCGCTT GAGCAAACCA ATGACAATGA AATCCCCCAG 
CACAGAAGCA TTAAGGTCGG TGAACATCTT TATATACATT TATTGCACCT GACACTCGAC 
ACCCCATTAC CCGAAGACTG TTGGATTGGC TATCAGTTAG ACTTTACGAC TCAAGACAAA 
GTCAACGTAA AGCTCACCGA GTTGCTCAGT GATATTTGTT ACCCACAGCG CCCCACTCCC 
GGTTTTGTGG TGCACCATAA ACTGCGAAAA ATTCTGCATG GCTCTTGCCG CAAACCTCAT 
CATGACAGCC CTGACGGCTT AGTGATTGCC GATACCCTGC TGAGTACTCT GCAAGATTCC 
CCGCAGCGGT GGCCGAGTCT AATAATGATG ACTGGGGACC AAATATACGC TGACGATGTG 
GCAACCCCCA TGTTAGCGGC CATTCACAGT GTTATCCCCT CTCTGGGCAT AGTTGACGAA 
ATCTTTTCTG ATTCAACCGT TAACAACAGC CACGATTTGC ACACTGAGCA GGCCTTATAC 
AATCAACGCA TACAGATTTT ACCAAATGAT AATCAAAGCC AAAAATTAAA GATCCCGCTT 
TTTAAGTCCG CTGAAAAGCC GGTCTTCACC ACGGTGCACG CGAATAATCA TTTGGTGTCG 
TTTGCAGAGG TCATCACCAT GTATTTATTG TGCTGGTCTC CTGAGTGCTG GGCAATTGCT 
AATACTGATA TACCTAGCTC TACTGGAGTT CAAAGCGCAA TAGGCGATCA AAGCGTTGAA 
GAATATCAAA GCGAGTTAGA CTTGATAGAA CAATTTGTGT CAGGCCTCTC ACAAGCAAGA 
CGCGTCATGG CACACCTGCC CTGCCCCATG ATGTTCGATG ACCACGATGT AACCGACGAC 
TGGAATTTAA CCGCAGACTG GGAACAAGCG GCCTACGGCA ATGTGTTCTC CCGACGAATA 
ATAGGTAATT CATTAATAGC CTATTTACTG TGCCAAGGAT GGGGTAACGC ACCGCAAAAC 
TTCAGTGATG AATTACTGCA AAAGATGCAA TTGAGTTTCC AGGACTTAGG CTGCCCAGAA 
CACGATGAAA CTATCACCAC ATTGTTAGCG TTTGAACAAT GGCATTACCA ATGGCCCACC 
TCGCCCAAAT TATTGGTGCT TGATACCCGC ACCCAGCGCT GGTGGTCAGA ATCGAACGCC 
AATAAACCAT CTGGTTTGAT GGATTGGGAG TCACTCACTG AATTGCAACA AGCTTTGATG 
AATGAGCCCG CTGTGGTGCT AGTGTCGCCA GCGCCTATAT TTGGGGTGAA ACTCATCGAA 
GCGATTCAAA GGGTATTTAC CCGTATTGGA AAACCACTGA TGGTGGATGC CGAGAACTGG 
ATGGCTCACC CCGGCAGTGC AAATTATTTA TTGAATCTAT TCACCCACCG AAAAACACCG 
CAGAACTTCG TGATTTTATC CGGCGATGTG CATTACTCCT ACGCCTACCA CGTGAAGTTA 
AAGCGAAGAC GCAACAGCCC TGATATATGG CAAATCACCA GTAGTGGCTT ACGCAATACC 
TTTCCTGAGA GTTTACTCAA CTGGCTAGAT AGGCTAAATC GTTGGTTATA CGCTCCCTAT 
TCACCGTTAA ATGTATTTAC CAAACGACGT AACATGCGCG TCACCCCGTT AAAGCCTTCG 
CACGCGTCTG CGGGTGAGCG TTTGGTCAAC GGCTCAGGCA TTGGCTTGGT AGAACTTGAC 
GATGAAGGAA AACCAACAAG TATCAGCCAA TTGTTGTTTG ATCAACAAAT ACAGTTTGAA 
GAAGCAGATA TTGTCAACTC ACCACACATG CGAAGACATG AAAGGTGA 

 

Protein sequence

MQQSALKVLA GPILKKLTCE QVTLWLVTNQ PIDINLSLSP EGQTAQTYPL EQTNDNEIPQ 
HRSIKVGEHL YIHLLHLTLD TPLPEDCWIG YQLDFTTQDK VNVKLTELLS DICYPQRPTP 
GFVVHHKLRK ILHGSCRKPH HDSPDGLVIA DTLLSTLQDS PQRWPSLIMM TGDQIYADDV 
ATPMLAAIHS VIPSLGIVDE IFSDSTVNNS HDLHTEQALY NQRIQILPND NQSQKLKIPL 
FKSAEKPVFT TVHANNHLVS FAEVITMYLL CWSPECWAIA NTDIPSSTGV QSAIGDQSVE 
EYQSELDLIE QFVSGLSQAR RVMAHLPCPM MFDDHDVTDD WNLTADWEQA AYGNVFSRRI 
IGNSLIAYLL CQGWGNAPQN FSDELLQKMQ LSFQDLGCPE HDETITTLLA FEQWHYQWPT 
SPKLLVLDTR TQRWWSESNA NKPSGLMDWE SLTELQQALM NEPAVVLVSP APIFGVKLIE 
AIQRVFTRIG KPLMVDAENW MAHPGSANYL LNLFTHRKTP QNFVILSGDV HYSYAYHVKL 
KRRRNSPDIW QITSSGLRNT FPESLLNWLD RLNRWLYAPY SPLNVFTKRR NMRVTPLKPS 
HASAGERLVN GSGIGLVELD DEGKPTSISQ LLFDQQIQFE EADIVNSPHM RRHER