Gene Patl_2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2857 
Symbol 
ID4174616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3463850 
End bp3464353 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content46% 
IMG OID638055871 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_662419 
Protein GI109899164 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000286038 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTAA TACGACATTT TACCCAACAA GATAAGACAC ACCTCATTCG CTGCTTAAAC 
ACGACTAACG TGACGCGTTT TTTGTCGAGT CGCATTCCTT ATCCGTACAC AGAAGATGAC
GCCATTTGGT GGATTGAACA GGGCAGTAAA ATTGGCATTA TTCGCGCAAT TGAAGTGGAC
GGTGAGTTTG TTGGCTGTGT GAGTGCTGAG CCAGGCCAGT TTGAATATAC GTATTCAGCT
GAAGTCGGTT ACTGGTTGGC TGAGCAGTTT TGGGGCAAGG GCTACGCCTC AAAAGCGCTT
GCTTTACTGA TTGATGAAGT GAAAAACAAC AGTGAAATAG TGCGCTTACA CGCCAGTGTA
TTTGAAGGCA ATCTGGCCTC TTGCCAGGTA CTAGAAAAAT GCGGCTTTAC TGCTGAGGGT
TACCTAAAAA AGGCGGTGTA CAAGCAGGGC TCGTTTTATA ACACGCATCT CTACGCTAAC
GTTATTAACG ATGCCAATGG CTAA
 
Protein sequence
MLLIRHFTQQ DKTHLIRCLN TTNVTRFLSS RIPYPYTEDD AIWWIEQGSK IGIIRAIEVD 
GEFVGCVSAE PGQFEYTYSA EVGYWLAEQF WGKGYASKAL ALLIDEVKNN SEIVRLHASV
FEGNLASCQV LEKCGFTAEG YLKKAVYKQG SFYNTHLYAN VINDANG