| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2842 |
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| Symbol | |
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| ID | 4174602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3444617 |
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| End bp | 3445726 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055858 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_662406 |
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| Protein GI | 109899151 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAGC AGTTACATCA AACCATTACC CCCTTTTTAA CCTTCTTTGG CGATAATCGT
TATACCCAAG CGGCGCTGGT TATTGTTCTT TCGTTTGTGG TTGCCTCGAT TTTTAAATAT
GTACTGATTG TGGCGCTAAA AGCCTTAATC TCGCGAGTTA ATACCGATTT AGATGGCAGT
TTTTTGCATT TGCTGCACAC CCCTATCTAT TACAGTTTGC TGTTGATGGG GTTTTCCAGT
GCGGCGTCAA TTCTCGCGCC GTCTGACTTG TATGCGCATA TTATATTTTC CTCGCTACAG
TCGATTTCGA TCCTTATTTG GACCGCGTTC TTTTTGCGCG CAAATCATGT TCTGTTGCGC
CAAATAGCGC TTAATCCTAA CCGCTTTCAT GCAGTGAATA ACAAGACGCT GCCACTGTTT
TTGAACTTGG TGAACATTAT TATTTTGGTG CTGGCGGTGT ATTTTGTGTT CTCGGTGTGG
GGCGTAGACA TGACCGCTTG GTTGGCATCA GCGGGAATTG TCGGTATCGC TGTGGGCTTT
GCTGCCAAAG ACACCTTGGC CAACTTGTTT TCTGGGGTAT TTATCATGGC AGATGCACCC
TATAAAATTG GCGATTATAT TGTGCTTGAC TCTGGCGAAC GGGGGGAGGT CACCCATATC
GGTATGCGTA GCACGCGTAT GCTAACCCGT GAAGATGTGG AAGTGACCAT TCCAAATTCA
GTGATGGGCA ATTCTAAAAT TATTAATGAA TCAGGTGGAC CCCATGAGAA GTCTCGCTGC
CGTGTGCCCA TTGGCGTATC TTACAATGCT GATATTGATG AGGTGCGTGA GGTACTGATG
CAGATAGCGT TCGCTGAAAA AGAATACGTG TGTGGCGACC CAGAGCCCAG AGTACGTTTT
CGCCGCTACG GGGCATCCGC GCTGGAGTTC GAGTTGCTGG TGTGGATCAC TAAACCCGCA
TTGCGTGGCA GAGTGATTGA CATACTCAAC AGTGAAATCT TTAAGCAGTT CAAGCAACGG
CAGATTGAAA TACCGTACTC TAAGCACGAT TTGTACATTA AAGAAATGCC TGATCGTCGC
GTAAATTATA CTGGTGAAGA GCCTGAATAA
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| Protein sequence | MFEQLHQTIT PFLTFFGDNR YTQAALVIVL SFVVASIFKY VLIVALKALI SRVNTDLDGS
FLHLLHTPIY YSLLLMGFSS AASILAPSDL YAHIIFSSLQ SISILIWTAF FLRANHVLLR
QIALNPNRFH AVNNKTLPLF LNLVNIIILV LAVYFVFSVW GVDMTAWLAS AGIVGIAVGF
AAKDTLANLF SGVFIMADAP YKIGDYIVLD SGERGEVTHI GMRSTRMLTR EDVEVTIPNS
VMGNSKIINE SGGPHEKSRC RVPIGVSYNA DIDEVREVLM QIAFAEKEYV CGDPEPRVRF
RRYGASALEF ELLVWITKPA LRGRVIDILN SEIFKQFKQR QIEIPYSKHD LYIKEMPDRR
VNYTGEEPE
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