| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2840 |
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| Symbol | |
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| ID | 4174600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3442533 |
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| End bp | 3443213 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055856 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_662404 |
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| Protein GI | 109899149 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCATTT TAATTGTCGA GGACGACAGC CGTTTATTAA CTCAGTTAGA CACGCTTTTA
CAAACCCATG GCTACAGTGT TGATTTAGCC GATGATGGCG CCAAGGCACT GTTTTTATTA
AGTGAACACC CTTACGACTT AGCGATTATC GATATCGGTT TGCCTGTTAT GGATGGCTTT
GAAGTCATTC AAAAAGCCCG AAAAAATAAT GTTTCTTGCC CTATCCTGAT TTTAACCGCG
CGTGATCGCT GGCAAGAAAA AGTCGAAGGG CTAGATGCCG GCGCCGATGA CTACCTGACT
AAGCCATTTC AAAACGAAGA ATTACTCGCC CGCGTTAAAG CTCTTATTAG GCGCTCTGCC
GGTCAAGCTA ACCCCACGAT TGAACTTGGC CCTATCAGCC TAAATACCTT AAGCGAGCAA
GTCAGCGTCA GCGGTACCGA TATTGAACTT ACGGCCTATG AATATAAGGT GTTTGAATAC
CTGCTGCTCA ACCCAAAAAA GGTAGTGTCT AAAACCGAGC TTACCGAACA CATATACGAT
CAAGACTTTG ATTTAGACAG CAACGTTATT GAAGTATTCG TTGGCCGCTT ACGTAAAAAA
CTCGACCCAC AAGGAAGCAT CAACCCGATT GAAACCATGC GCGGGCGTGG TTATCGCATC
AGCCGAGAAT TTCAAGTTTA A
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| Protein sequence | MRILIVEDDS RLLTQLDTLL QTHGYSVDLA DDGAKALFLL SEHPYDLAII DIGLPVMDGF
EVIQKARKNN VSCPILILTA RDRWQEKVEG LDAGADDYLT KPFQNEELLA RVKALIRRSA
GQANPTIELG PISLNTLSEQ VSVSGTDIEL TAYEYKVFEY LLLNPKKVVS KTELTEHIYD
QDFDLDSNVI EVFVGRLRKK LDPQGSINPI ETMRGRGYRI SREFQV
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