| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2827 |
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| Symbol | |
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| ID | 4174587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3428385 |
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| End bp | 3429005 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055843 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_662391 |
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| Protein GI | 109899136 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAAT TTTTTTATAT TCATCCTGAC AACCCTCAAG CACGACTCAT TAAACAGGCG
TGTGAGTTAA TTCATAATGG CCAAGTAGTG GTGTATCCAA CAGATTCTGG CTACTCCATT
GGCTGTCATA TGGATGACAA AAGCGCCCTA GAGCAAATCT GTCGTATTCG CCAAATCGGT
AAAGATCATA ATTTCACGTT GATGTGCCGA GATATGTCTG AGTTGTCAGA ATACGCACAG
GTCGACAACG CCGCATTTCG TATGATCAAA AACAATACGC CTGGGCCGTA TACCTTTATT
TTGAAAGCGA CCAAAGAAGT GCCTAAGCGC TTGCAAAATC CTAAGCGCCG TACCATAGGT
ATTCGAGTGC CAGATAACGC TATCGCCTTA GCCTTGCTTG AAGAACTGGG TGAGCCGCTG
ATGTCGACCA CGCTTATTTT ACCGAATGCA ATCGTTGCTG AGTCTGATCC TGACGAAATT
CGCGACAAGC TTGAGAAGCA GGTAGGCCTA ATTATTCATG GGGGGTTCTT AGGAGAGCAG
CCCACCACTG TGATTGACTT GTCGGATGGC GAGCCTACGA TTATTCGTGA GGGCAGCGGC
GACGTTAGCC CGTTTAACTA A
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| Protein sequence | MSQFFYIHPD NPQARLIKQA CELIHNGQVV VYPTDSGYSI GCHMDDKSAL EQICRIRQIG
KDHNFTLMCR DMSELSEYAQ VDNAAFRMIK NNTPGPYTFI LKATKEVPKR LQNPKRRTIG
IRVPDNAIAL ALLEELGEPL MSTTLILPNA IVAESDPDEI RDKLEKQVGL IIHGGFLGEQ
PTTVIDLSDG EPTIIREGSG DVSPFN
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