Gene Patl_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2813 
Symbol 
ID4174573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3414176 
End bp3415366 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content45% 
IMG OID638055830 
Producthypothetical protein 
Protein accessionYP_662378 
Protein GI109899123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.767997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGT TACGCCGAGC ACTTTTTGCT TACTTACTTC CTCTTCTCGC GCTTGGTTTA 
TACAGTCAGC AAACCCTAGC GGTATGGTAC CAAGGGAATG CACAGTTGGC CGTAGATGGG
GTTGATCTTA ACGTTATTCG CGCGGCGGCG ATTAAAAATG CCATTGCCGA TGCTTCTTTT
CAGCATGGCA TCATGATCAC CGCCAAAGAC ATTTCACTCG ATGGATTATT GCAAAGCAGC
AAAACCGAAT TGCGCAGTGA AGGTAAAATC AGGCGCGTCG AAATTCTCAG TGAAGAAGTT
ATCGATGATG TTTTACACGT GTACGTGAAA GTCGATATTG AACCCCTTTT TGACTGTAGC
CATGACAACT ACATGCGCGC TTTGCTTGTT ACCCAACTGC CCGTGCTAAA ACCTGCTCAA
GCCAGTTACG GCGCTATTTT TGATCTAGGG CCACAGGTCA GTAAACGTGT AGAACAGCAA
TTATTCTCGG ATGAGTTGGT GGCAAAAGTA CAACTGATTA ATCAGGTATT TATTCCTAAA
AGCGTGCTGC AAGAGCCTAC CTTTGGGTAT ATTTCCCAGA CCGCTCGTCA TCTGGCAAAT
CAATATCACA GCCAATTTGT GCTGTTTGGC TATATCAGAG ACATTAGTCT TTTTGAGCAA
ACCACTAAAG GCTTGATCAG CGATGATGTG GCCCTTAGGC GCAACTTCAC TATGCAACTG
TATTTATTTG ATGCCTTTAA CAACAAGATG CTGGTGAATC AAAGTTATCA TGGCGAAGCA
GATTGGAGCT TTGATGCCAC CTACCCGGTC GATACTTACA ATAGCCTTTT TTGGCGCAGC
GATTACGGCC GCGTCGTATT GAACACGATC AATAGCGCGG TCATTGATAT CAGCAACACT
CTCACCTGCC AGAAATCACT TGGCCAAATC ATTCACAAAA ACAATCAACA GATAGTGATT
AATATTGGTA GTGAAATGGG CGTCGCAAGC GGAGACAGGT TTCAACTGAT TAAAAGCGAA
GCCATACCCG GTCAAAATGG TGATATGTTC AACACATTGA CCAACGAAGA CGAACACGTA
TTAACCGTAG TCAGTGTAGA TGCACAAACC GCCACGTTGA CCAGCAAAGA CGCCAGCCTT
TTCAACAACA GCAATTTGTT TGACCTCGTC AGCCCGCTTG CGGGCTATTA A
 
Protein sequence
MNALRRALFA YLLPLLALGL YSQQTLAVWY QGNAQLAVDG VDLNVIRAAA IKNAIADASF 
QHGIMITAKD ISLDGLLQSS KTELRSEGKI RRVEILSEEV IDDVLHVYVK VDIEPLFDCS
HDNYMRALLV TQLPVLKPAQ ASYGAIFDLG PQVSKRVEQQ LFSDELVAKV QLINQVFIPK
SVLQEPTFGY ISQTARHLAN QYHSQFVLFG YIRDISLFEQ TTKGLISDDV ALRRNFTMQL
YLFDAFNNKM LVNQSYHGEA DWSFDATYPV DTYNSLFWRS DYGRVVLNTI NSAVIDISNT
LTCQKSLGQI IHKNNQQIVI NIGSEMGVAS GDRFQLIKSE AIPGQNGDMF NTLTNEDEHV
LTVVSVDAQT ATLTSKDASL FNNSNLFDLV SPLAGY