| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2809 |
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| Symbol | |
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| ID | 4174569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3408361 |
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| End bp | 3410484 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055826 |
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| Product | helicase c2 |
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| Protein accession | YP_662374 |
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| Protein GI | 109899119 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAAGT CTTCTAAACT GTTTGCCCAA GATGGCATTT TATCTCAAGC GATCCCCGGA
TTCACAGTAC GCCAAGCGCA AACCGATATG GCGAATGCGG TAGAAGAGAC TATCGAGCAT
AAATCCCCAC TGATTGTTGA GGCGGGTACC GGCACAGGTA AAACCTTTGC GTATTTAGCG
CCAGCATTAC AATCGAAGAA AAAAACTATT GTGTCTACGG GGACCAAAAA CCTGCAAGAA
CAGCTCTACC ACAGAGACTT GCCCTTGATT AAAAAAGCCA TCGGGGTAAA CGGCAAAATT
GCGCTGCTAA AAGGGCGTTC AAACTACTTA TGTTTGCACC GCCTGCGTCA GCACGGTGGC
AGCAGTACCT TACTTGACAA AACAACCATG GTGGAGCTGT CTGATGTGCG CCGCTGGGCG
ACATCGACTA AAACCGGCGA CATGGGGGAA ATGAAAACCC TCGCCGAAGA TGCCAAAGTC
TTACCGTTTG TGACTTCTAC GGTGGATAAT TGCTTAGGTA AAGATTGCCC CGACTACGAA
GACTGCTACA TGATCAAAGC GCGGCGCAAA GCCCTCGATG CTGATTTGGT CGTGGTCAAT
CACCATTTGT TTTTTGCTGA CATGGCGCTA AAAGACACCG GCTTTGGCGA GCTTATTCCA
GAAGCTGATG TGGTCATATT CGATGAGGCT CATCAGATAC CGGATATTGC CAGTGAGTAT
TTTGGTGAAG CGCTATCAAG CAGACAATTG CACGACCTAA GCCGTGATTT GGAGCTGGTG
TATCGCACGT CTTTAAAAGA CGCTAAGCAG TTACACAGCG CCGGTGAAAA ATGCAAAATG
ATCTCTGCCG ACTTACGTTT ATTGTTTCCC GAGCAAGCGC AAAAAGGGAA TTGGCGAGAA
ATGTTGGCGC GCAATGATGT ACAAACCCAA ATCAGTAAGT TGATTGACTC GTTAGATGTG
TTGTACGAAG TGATCAAATT GCATTTGAGT CGCGACAAAG ACTTAGACAG TATTTTTGAG
CGAGTCAGTG ATGCCAGAAT GAAGCTAACG CGCCTCACCG ATGCCAACCA AAAGGGCGTG
AGCTTGTGGT ATGAAACCAC CATGCGCCAT ATAGTGTTGC ACCTAACACC GTTGAGCATC
GCGGCGAAAT TTTCTAAAAT AGTCTCAACC CCTGAGCGTG CATGGATCTT CACTTCAGCC
ACATTAATGG TCGGTGATGC TTTTGATCAT TTTCAGCGAC AAATGGGCTT GCAACACGCT
AAAACACTTT CGCTGGATAG CCCTTTTGAT TACCAAAAAC AGGCCATGTT GTGTGTCCCG
CGTTTTTTAC CTGAGCCCAA TGCCAGAGAA ATGCGGCAAA CCTTGTTGGA TATCTCCCTT
AAGTTAATAG CGGCCAGTGG TGGGCGGTGT TTTTTATTGT TCACCAGTCA CGCGACTTTG
CGCGCCATTG CCGGCATGTT GGAAGACAAG GTAGACAACC CTATTTTAGT GCAAGGCACA
ACGACTAAGC GTGCGCTTTT GGAGTCATAT GTAAAAAGCG ACAATGCTGT GCTGCTTGGC
ACTGGTGCAT TTTGGGAAGG GGTGGATGTC AGAGGTAACG ATTTAACGTG TGTTTTGATT
GATAAATTGC CTTTCGCCTC ACCGGATGAT CCCTTGTTAC AAGCGCGAAT TGAAGATTGC
CGTAAAGCCG GTGGCAACCC CTTTGGTCAG TTGCAAATCC CTCAGGCTGC GATTGCGTTA
AAACAAGGGG CAGGGCGCTT AATTCGGGAT GAAACAGACA GAGGGGTGCT GGTCATTTGT
GATAATCGAC TGGTGACCAA AGACTATGCG AAAACGTTTT TACGTAGTTT ACCTGATATG
AAACGCACGA GACATTTGCC AAATGCATTA GCCTTTCTTG AAGAGATCCA TGAAGATGCT
CAGCAAGCGA AGAAAGTACT TAAGGCCGCT AAAAAAACAG CAGATAATCA ACGTCGGCAA
AATGCAATAA ACACAGGGGA TCGAGCTAAT GAAGAGTTTG TCTCTCAAGA AATTACTCAT
GACAGTAGTC GAGACGTTAG TCAAAACGTT AGTCAAAACA TAGCTACCGG TACCAACGAT
ATTTTAAAGA AGGAAGCACA ATGA
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| Protein sequence | MSKSSKLFAQ DGILSQAIPG FTVRQAQTDM ANAVEETIEH KSPLIVEAGT GTGKTFAYLA
PALQSKKKTI VSTGTKNLQE QLYHRDLPLI KKAIGVNGKI ALLKGRSNYL CLHRLRQHGG
SSTLLDKTTM VELSDVRRWA TSTKTGDMGE MKTLAEDAKV LPFVTSTVDN CLGKDCPDYE
DCYMIKARRK ALDADLVVVN HHLFFADMAL KDTGFGELIP EADVVIFDEA HQIPDIASEY
FGEALSSRQL HDLSRDLELV YRTSLKDAKQ LHSAGEKCKM ISADLRLLFP EQAQKGNWRE
MLARNDVQTQ ISKLIDSLDV LYEVIKLHLS RDKDLDSIFE RVSDARMKLT RLTDANQKGV
SLWYETTMRH IVLHLTPLSI AAKFSKIVST PERAWIFTSA TLMVGDAFDH FQRQMGLQHA
KTLSLDSPFD YQKQAMLCVP RFLPEPNARE MRQTLLDISL KLIAASGGRC FLLFTSHATL
RAIAGMLEDK VDNPILVQGT TTKRALLESY VKSDNAVLLG TGAFWEGVDV RGNDLTCVLI
DKLPFASPDD PLLQARIEDC RKAGGNPFGQ LQIPQAAIAL KQGAGRLIRD ETDRGVLVIC
DNRLVTKDYA KTFLRSLPDM KRTRHLPNAL AFLEEIHEDA QQAKKVLKAA KKTADNQRRQ
NAINTGDRAN EEFVSQEITH DSSRDVSQNV SQNIATGTND ILKKEAQ
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