| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2803 |
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| Symbol | |
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| ID | 4174563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3402199 |
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| End bp | 3403401 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055820 |
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| Product | ribonuclease D |
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| Protein accession | YP_662368 |
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| Protein GI | 109899113 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGGCTT TTTTATTTGT TTGGAAACAC GTGCAATATA TTTCAATTAC CACAGATGAA
ACGTTGAACG CATACTGCGC TCAACTGGCA AAAGCCCAAG CGATTGCCGT AGATACAGAG
TTTGTGCGAA CACGCACTTT GTATCCACAA CTCGGTTTAA TTCAGATTTA CGATGGGCAG
CAAATCGCGC TTATCGATCC ACTGGAAATC AGCGATTTCA CTGCGCTTAA AGCGATTTTG
ACCGACGAAA ATATCGTTAA AGTGTTGCAC TCGTGTTCAG AAGACATCGA AACCTTTATT
TGTGCTCTTG ATATCGTTCC TCGTCCTATC TTTGACAGTC AATTCGCTGC TGCTATTACC
GGCATGGGAC CGTCTTTAGG GTATGCTAAG TTGGTAGAGG TGATGCTAGA TATTCAGGTC
GATAAAGGAG AGTCGCGCAC AGATTGGCTT GCCAGACCTT TATCGCCTAA GCAGTGTCAA
TACGCGGCTT ATGATGTGTT GTATTTGTTT CAGCTTTATC CCACGTTGTG TGATAAAACG
CTTGCTCAAG GTCGCCAAGC TTGGGTGTTT GCCGAAATGG AAAACTTAAC GCGCAAAAAG
CTGAGTCAAG TTCCCTACGA ATTACTCTAC TTAAATATAA AGAATAACTG GCATGTAACC
GGCAAATCCC TGTATGTGTT ACAGCAATTA ACCGCTTGGA GGGCCAAAGA AGCGCAGCAG
CGTGACTTAG CCTTGAACTT TGTAGTTCGT GAAGCAAATT TGGTGGAGGT AGCGAAACGT
CTTCCGGCAA GTAAAAACGC GCTGCATCAA ATCAGTGGAT TAACCCCTCA AGAAATTCGT
ATTAACGGTC AAGCAATGCT TGATATCGTA GCCGCCGCAG AGCATGTGGA TGAATCAGCT
TACCCCCAGC CAGTCGAACG CTTAGTCGAT TTTTCACGCT TTAAGAAGGT CGCTGCAGCA
GTGCGCCAAG TCTGCGTGCA AACAGCAGAA AAACTGGGGG TGCCGGTTGA ACTTATAGGC
TCAAAAAAGC AAATCAATCA GTTGATAAAG TGGTGTTGGT TCCTTGACGA CGATACGCGT
GCGCAAGGTT TGTTGCCAGA CTTATTAGAG GGCTGGCGCG GTGAGCATTT GCAGGCTGCA
CTGGCGAAGG TCGATGGTTT AAATATAGCC CAATCAATCA GTGAGGACTC AACCCATGCT
TAA
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| Protein sequence | MLAFLFVWKH VQYISITTDE TLNAYCAQLA KAQAIAVDTE FVRTRTLYPQ LGLIQIYDGQ
QIALIDPLEI SDFTALKAIL TDENIVKVLH SCSEDIETFI CALDIVPRPI FDSQFAAAIT
GMGPSLGYAK LVEVMLDIQV DKGESRTDWL ARPLSPKQCQ YAAYDVLYLF QLYPTLCDKT
LAQGRQAWVF AEMENLTRKK LSQVPYELLY LNIKNNWHVT GKSLYVLQQL TAWRAKEAQQ
RDLALNFVVR EANLVEVAKR LPASKNALHQ ISGLTPQEIR INGQAMLDIV AAAEHVDESA
YPQPVERLVD FSRFKKVAAA VRQVCVQTAE KLGVPVELIG SKKQINQLIK WCWFLDDDTR
AQGLLPDLLE GWRGEHLQAA LAKVDGLNIA QSISEDSTHA
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