Gene Patl_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2798 
Symbol 
ID4174558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3399242 
End bp3399736 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content44% 
IMG OID638055815 
Producthypothetical protein 
Protein accessionYP_662363 
Protein GI109899108 
COG category[S] Function unknown 
COG ID[COG2983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.786564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATA AATTTTGGCT TGATACGCCA CTTGAAAAAA TGAATGAAGC ACAATGGGAA 
TCGATCTGTG ATGGATGTGC CAAGTGCTGT CTGCACAAGT TTATTGATGA CGATGAAGCA
GAAACAGCTG CCCCTACGGC GCACATAAAC AGTGGTGAGC AGATCCACTA CACTAATATC
GCATGTGGTT TGCTGAACAC TAAAACCTGC AATTGCACCC GCTATGACGA GCGCACCATA
TTGGTCCCGG ATTGTGTCAA GCTGAGCAAA GAAAATATAG ACGACATATT TTTCATGCCT
ACCAGCTGCA GCTATCGCCG GTTGCATGAG GGGCGCGGTT TACCGTCATG GCATCCACTT
TTAAATAAAG GCAAAAAAGC CAAAATGCAT AAAGTGGGTA TGTCGGTACG CGGCAAAACC
GTATTTGATC ACGATGTCGA ACTGGAAGAT TTTGAAGACT ATATTGCCAT ATGGCCACTG
GAAGATACGG ATTAA
 
Protein sequence
MNDKFWLDTP LEKMNEAQWE SICDGCAKCC LHKFIDDDEA ETAAPTAHIN SGEQIHYTNI 
ACGLLNTKTC NCTRYDERTI LVPDCVKLSK ENIDDIFFMP TSCSYRRLHE GRGLPSWHPL
LNKGKKAKMH KVGMSVRGKT VFDHDVELED FEDYIAIWPL EDTD