| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2795 |
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| Symbol | nhaB |
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| ID | 4174555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3395069 |
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| End bp | 3396649 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055812 |
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| Product | sodium/proton antiporter |
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| Protein accession | YP_662360 |
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| Protein GI | 109899105 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3067] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0542405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAT CGACCATCGG CGCAGTTTAT AGCAATTTCT TGGGTCAAGC CCCTGATTGG
TATAAAAAAT CTATTATCGC CTTCCTTATT TTTAACCCAA TCCTATTCAT GGCAGACCCG
TACATAGCTG GCTGGGCGTT AGTATTAGAG TTTATTTTTA CTCTTGCGAT GGCGTTAAAA
TGCTATCCAT TGCAACCCGG TGGCCTTCTG TTGATTGAAG CACTCTTTAT CGGGATGACC
TCCCCGGAAC ACATGAAGCA TGAAATAGTC GTCAATATAG AGGTGGTTTT GCTGCTGGTC
TTTATGGTGG CGGGTATCTA TTTCATGAAA GACATGCTGT TGTTTATGTT CACTAAATTA
CTGCTTAAAC TTAAAAACAA GATTGCCTTG TCGATGTCGT TTGTTGCAGC ATCCGCTTTT
TTGTCAGCCT TTTTAGATGC ATTAACGGTT GTGGCGGTCA TTATCGCTGT CGGCATGGGC
TTTTATTCTA TCTATCATAA AGTTGCCTCT GGTAAGGAGT TTCACTCTGA TCACGACCAC
ACCAGCGACG ATCACGTTGA CCACCCAAAG CGCCAAGATT TGGAAGATTT TCGGGCGTTT
TTGCGTAACC TAATGATGCA CGCTGCGGTA GGTACTGCAT TGGGCGGCGT GATGACCATG
GTTGGTGAGC CACAAAATTT AATTATTGCA GATAAAGCCA GCTGGAATTT TGGTGAATTT
TTTGTGCGCA TGTCGCCGGT CACTATTCCT GTATTTTTCG CCGGAATTGC CACCACTTTC
GCCTTAGAGA AGTTTAAAAT ATTCAGTTAT GGCGCACAGT TACCTCAAGT TGTTCGCGAT
ATTTTAACCG CTCACAGCCA CCAGCAAGAA GCCACCCGTA CCAAACAAGA CAGTGCTAAA
TTGTGGATCC AAGGTTTCAT CGGCATATGG CTTGTGATTG GATTGGCAGG CCACTTCGCT
GCCGTAGGCT TAATTGGCTT ATCTATTATC GTGTTGGCGA CCTCCATGAA TGGCATCATC
GATGAGCACT CAATCGGTAA AGCATTCGAA GAGGCGTTGC CCTTTACAGC CCTATTATGC
GTTTTCTTTG GGGTTGTAGC AGTCATCATT GACCAAGGCC TATTCACGCC TGTTATCGAT
TGGGTGCTGA CCTTCGAAGG CCGTTCACAA CTAGTGATGT TCTACTTAGC CAACGGGGCG
CTATCCATGG TCAGTGACAA TGTGTTTGTT GGCTCTGTTT ACATTACCGA GGTAGCTGCA
GCACTTGAAC ATGGTCACAT CACCCGCGAT GAATTCGATA TGCTAGCCGT TGCAATTAAC
ACAGGTACAA ACTTACCCAG TGTGGCAACG CCGAACGGAC AAGCTGCTTT CTTGTTCTTG
TTGACCTCTG CAATTGCACC GCTATTACGC TTGTCATACG GCACAATGGT GTACATGGCG
CTACCCTACA CCATTGTACT GACTATCGTT GGGCTAGCTG CAACATACTT CGGCTTGGGA
GATTTAACCA ACTGGCTGTA TGATATGCAT CTCATAGAGC ACCACAGCGC GACCTTAGGC
GCTGAAGCCG CAGCGCACTA A
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| Protein sequence | MQQSTIGAVY SNFLGQAPDW YKKSIIAFLI FNPILFMADP YIAGWALVLE FIFTLAMALK
CYPLQPGGLL LIEALFIGMT SPEHMKHEIV VNIEVVLLLV FMVAGIYFMK DMLLFMFTKL
LLKLKNKIAL SMSFVAASAF LSAFLDALTV VAVIIAVGMG FYSIYHKVAS GKEFHSDHDH
TSDDHVDHPK RQDLEDFRAF LRNLMMHAAV GTALGGVMTM VGEPQNLIIA DKASWNFGEF
FVRMSPVTIP VFFAGIATTF ALEKFKIFSY GAQLPQVVRD ILTAHSHQQE ATRTKQDSAK
LWIQGFIGIW LVIGLAGHFA AVGLIGLSII VLATSMNGII DEHSIGKAFE EALPFTALLC
VFFGVVAVII DQGLFTPVID WVLTFEGRSQ LVMFYLANGA LSMVSDNVFV GSVYITEVAA
ALEHGHITRD EFDMLAVAIN TGTNLPSVAT PNGQAAFLFL LTSAIAPLLR LSYGTMVYMA
LPYTIVLTIV GLAATYFGLG DLTNWLYDMH LIEHHSATLG AEAAAH
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