| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2790 |
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| Symbol | |
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| ID | 4174550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3387027 |
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| End bp | 3388052 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638055807 |
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| Product | mandelate racemase/muconate lactonizing-like protein |
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| Protein accession | YP_662355 |
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| Protein GI | 109899100 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTTC AAGTTGAGGC TTACCAACAA GCGCTGCCTC TTAAAAGTGT ATTTCGTATT
GCACGAGGTG CTAAAACACA AGCCGATGTA GTGGTGGTCA CCTTAACCGA TGGCGTACAC
ACAGGCTGGG CTGAATCAGT CCCTTATGCC CGCTACCAAG AGTCAGTGCA AAGTGTACTG
GAGCAAATTG ACCAAACGGC TAAGAGCTTG GCTACATTCG AGGGCGATAT GAGCGGAGTT
CGCGCGCGCA TTAATGCAAT GCCCTCAGGT GCTGCGCGCA ATGTTATGGA CTGCGCCCTG
TGGGATTTAG TGGCGAAGTC ACAACAAAAA TCTGTGGCAC AACTATTGTC TGTATCAACC
CCAGCGCCCT GCGTGACGGC GCAAACGCTA AGCATAGACA CGCCCGAAGC CATGGCCGCA
GCGGCGAAAG CTCTGGGCCA TCCTCCACTG ATTAAAGTGA AATTGGATAA CCAAGACATC
GTCGAGAAGA TGCAAGCCAT ACATTTAGCT TCCCCCGACA GCCAGTTTAT TGTGGATGCC
AATGAAGGTT GGTCTATCGA CGATTTAAAA GCCTGCGGTG ATAACTTAAA AGCACTGAAT
GTAATCTTAA TTGAACAGCC GTTACCGGTA GGCGACGACG CAGATTTAAT AGATTACAGC
TGCCCCGTGC CACTATGCGC CGATGAAAGT TGCCATACCC GTGAAGAATT GGCTTACCTA
AAAGGCCGCT ATGATGCAGT TAATATTAAG TTGGATAAAA CAGGTGGCTT AACGGAGGCC
TATGCTCTCG CCCAAGAAGC CCAAGCAATG GGCTTTGAAA TAATGATTGG GTGCATGGTG
GGTAGCTCTC TAGCCATGGC GCCGATTTCT TTGTTAAGTG ACTGGGCTAA ATACGTGGAT
TTAGACGGCC CACTGTTAAT TAAAACAGAC AGAGAAAATG GCTTTGCGAT TAAAGACGGC
GTGATGCAAC CTTTAAACCC CGCGTTATGG GGTTCCCCAC AAAGCCAAGT GATTTTGGAA
AGATAG
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| Protein sequence | MGFQVEAYQQ ALPLKSVFRI ARGAKTQADV VVVTLTDGVH TGWAESVPYA RYQESVQSVL
EQIDQTAKSL ATFEGDMSGV RARINAMPSG AARNVMDCAL WDLVAKSQQK SVAQLLSVST
PAPCVTAQTL SIDTPEAMAA AAKALGHPPL IKVKLDNQDI VEKMQAIHLA SPDSQFIVDA
NEGWSIDDLK ACGDNLKALN VILIEQPLPV GDDADLIDYS CPVPLCADES CHTREELAYL
KGRYDAVNIK LDKTGGLTEA YALAQEAQAM GFEIMIGCMV GSSLAMAPIS LLSDWAKYVD
LDGPLLIKTD RENGFAIKDG VMQPLNPALW GSPQSQVILE R
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