| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2786 |
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| Symbol | |
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| ID | 4174546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3380954 |
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| End bp | 3383092 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055803 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_662351 |
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| Protein GI | 109899096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0046774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATCT CATTTATCGC CGCCGCTGTA GGTGCCACCT TAGTACTCGG TGCATGTTCA
ACCAACGTGG TTAATCATCA ACAAACCAAC AAAGAGCAAG CTAAAGCCAT GGCTGCATCC
AGCAACAATG TATTGTTTAG AAAAAGCCCG CTGACATATC AAGCCCCCCA ATTCGATAAG
CTCACCATGG CAGATTATGA GCCTGCTTTT AAAGCCGGCA TAGAGCAGCA TAATATCGAA
ATCGCTGGTA TTACTGATAA TCCAGCCTCG CCCACATTTG ATAATACTAT TGTGGCCATG
GAAAAATCAG GTGCCCTACT AACCCGCGTC AGTAAAGTCT TTTACAACCT ATCAAGCGTG
ATCTCCAACG ATGATTATCA GCGCATCGAA GCACAGATGG GCCCTAAGCT CACCGCGCAC
GATGACAACA TTTACCTTGA TGCGAAACTA TTTGCTCGTA TTCAAAGCAT TTATGCTGAC
AAAGCCTCAC TGAATGCCAT CGATCAGCGC TTAGTTGAGC ACTACTACCA GAAATTTGTG
CGCGCAGGGG CAAAACTCAG CGACGCCGAC AAAGCAACCG TGCGCGAGAT CAATGGTCAA
CTTTCAAGTT TGGCCACAGA GTTTTCGCAA AATTTACTCA AATCGTTCAA GCAGGACACC
ATTCTTGTTA CCGATAAAAG CGAACTGAGT GGTTTATCGG ACGCTGAAAT AGCGACCCTT
GCTAGTGCGG CTAAAGAAGC GGGCAAAGAA GGTTACTTAA TAACGCTTGT GAACACGACG
CGCCAACCTA TTCTTGGCAG TTTAGCGAAC CGCGATCTGC GTAAAAAGAT TTGGCAAGCG
TCTGCTCATC GCGCCATGGC CAGCAATGGC CCAGTGCTTA TCAAACTAGC CGAGCTTCGG
GCACAAAAAG CACAGCTGCT AGGTTACCCC ACTTGGGCGG CATATGTGAC CGCAGACCAA
ATGGCCAAAA CCCCGGCGGC GGTTTACGAA ATACTCGACG ATTTGGCCCC TAAGGCGGTC
GCCAAAGCGC AAATTGAAGC GCAAGCTGTT CAACAACAGA TCGAAGCTGA TGGCAAAGAC
TTTGCTGTAC AGCCATGGGA TTGGGCGTTT TATAGCGAGA AAGTGCGTAA AGCGAAGTAC
GATCTTGATG AAAGCGCAAT TAAGCCTTAT TTCGAACTTG AGCGCGTACT GCATGATGGC
CTTTTCTTTG CGATGCAAAA ACTTTATGGC ATCACCTTTA AAGCCCGTAA GGATTTACCA
GTATACCAAG ATGATGTACA AGCCTTTGAA GTGTATAACG AAGACGGTAG TAGCATTGGC
CTGTTCTACT TTGACCCTTA TGCCCGTGAA GGCAAAGGCG GCGGCGCATG GATGGACGAA
TTTGTTACCC AAAGCGACCT ACTCGGCCAA AAGCCGGTCG TTTACAATGT ACTTAACATC
CCTAAACCCG CAGCGGGTCA GCCGACACTA TTAACCTTCG ATGAAGTGAC CACCTTGTTT
CACGAGTTTG GCCATGCAGC TCACGGGCTA TTTTCCCAGG TGAAATACCC AAGCTTAGCG
GGTACCTCAA CAGCACGTGA CTTTGTGGAG TTCCCGTCTC AATTCAATGA AGATTGGGAT
ATCGACCCAG AGGTACTTGC TCATTATGCG AAGCATTATC AAACGGGCGA AGCGATCCCA
AAAGACTTAT TAGACAAGCT ACTTTCAGCT CATCACTTTA ACCAAGGGTT TGATACCACT
GAGTATTTAG CATCCGCTTT GCTAGATATG GAATGGCATT CAATTCCGGC CGGTACCAAA
ATCACAGACG TAGCTGATTT TGAACAAAAA GCGTTGGCTA AACACGGCAT CGATTATGCG
CCAGTGCCAC CGCGCTATAA ATCTGCCTAT TTTAGCCATG CCTTCGCCGG TGGTTATTCT
GCGGGATATT ACGCTTATTT ATGGACTGAG GTATTCGCAG CTGATGCCTT TGCCTATATG
GCAGAGCATG GCGGTTTAAA CCGTGATAAC GGCGATAAAT TCCGTAGCCG CGTGCTATCG
ATGGGTAACA GCCAAGATTT GATGCAAGAC TATCTCGATT TTCGCGGCAG TAAACCCAGC
ACAGATGCAT TATTAAAACG TCGCGGCTTA GACGAGTAG
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| Protein sequence | MRISFIAAAV GATLVLGACS TNVVNHQQTN KEQAKAMAAS SNNVLFRKSP LTYQAPQFDK
LTMADYEPAF KAGIEQHNIE IAGITDNPAS PTFDNTIVAM EKSGALLTRV SKVFYNLSSV
ISNDDYQRIE AQMGPKLTAH DDNIYLDAKL FARIQSIYAD KASLNAIDQR LVEHYYQKFV
RAGAKLSDAD KATVREINGQ LSSLATEFSQ NLLKSFKQDT ILVTDKSELS GLSDAEIATL
ASAAKEAGKE GYLITLVNTT RQPILGSLAN RDLRKKIWQA SAHRAMASNG PVLIKLAELR
AQKAQLLGYP TWAAYVTADQ MAKTPAAVYE ILDDLAPKAV AKAQIEAQAV QQQIEADGKD
FAVQPWDWAF YSEKVRKAKY DLDESAIKPY FELERVLHDG LFFAMQKLYG ITFKARKDLP
VYQDDVQAFE VYNEDGSSIG LFYFDPYARE GKGGGAWMDE FVTQSDLLGQ KPVVYNVLNI
PKPAAGQPTL LTFDEVTTLF HEFGHAAHGL FSQVKYPSLA GTSTARDFVE FPSQFNEDWD
IDPEVLAHYA KHYQTGEAIP KDLLDKLLSA HHFNQGFDTT EYLASALLDM EWHSIPAGTK
ITDVADFEQK ALAKHGIDYA PVPPRYKSAY FSHAFAGGYS AGYYAYLWTE VFAADAFAYM
AEHGGLNRDN GDKFRSRVLS MGNSQDLMQD YLDFRGSKPS TDALLKRRGL DE
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