| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2782 |
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| Symbol | |
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| ID | 4174542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3376235 |
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| End bp | 3378409 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055799 |
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| Product | prolyl oligopeptidase |
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| Protein accession | YP_662347 |
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| Protein GI | 109899092 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1505] Serine proteases of the peptidase family S9A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.119974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA CGCTTATCGC AGTCAGTATC AGCGCAATGC TTATGGGGTG TAGCAACGCG
AACCATTCTG CTAACCAAAC CCCAGCGACA ATGAAGACTT CTATTACGAG TAACCAATTA
CAAGAAATGA ACTTATCTTA TCCAAAAACG CAAAAAGGTG ACGTAATCGA CACCTACTTC
GGCAAGCAAG TAGCCGACCC TTACCGCTGG TTAGAAGACG ATATGAGCAG CGAAACTGAG
CAATGGGTAA AAGCTGAAAA CGCCGTGACC CAAGCCTACT TAGCGCAAGT CCCTTCACGC
GATAAATTAA AAGAGCGCTT AAAAGTGTTG CTTGACTACG AAAAAGTTGG CGCCCCATTC
AAAGAAGGAA AATACACCTA TTTCTTTAAG AACGACGGCC TGCAAAACCA AGCCGTGCTA
TATCGCCAAT TGGACGATGG CGAAGCTCAG GTATTTTTAG ATCCCAATTC ATTTAGTGAT
GATGGCACGA CCTCATTGGC CAGCATCGAT TTTTCAAAAG ACGGCAGTTT AGTTACCTAT
TTGATTTCAG AAGGCGGCAG CGATTGGCGT AAAGCGATCA CCATTGATGT AGAAACCATG
CAGCCTGTTA GCGAAACCTT AAAAGACATT AAATTCAGTG GCATATCTTG GTTAGGTAAT
GAAGGTTTTT ATTATTCAAG CTACGACAAA CCAGAGGGCA GTGAACTGTC TGCGAAAACG
GACCAGCACA AGCTGTATTT CCATCGTTTG AACGATAAAC AAACCCAAGA CACCCTTGTT
TTTGGCGGTA CTGACGAGCA AAAAAATCGC TATGTATCAG GCCAGGTGAC CGAAGATAAC
CGCTATTTAT TAATCAGTGC TGCCGTTTCC ACCTCGGGTA ACAAACTGTA TTTAAAGGAT
TTAAGCGAAC CAGATAGTCC TTTGGTGACC ATCTTAGAAA ACACAGATTC AGACACAAAC
CTGCTTGATA ACGAAGGCAG CACCTTGTTG TTTGTGACCA ATTTAGATGC GCCCAATAAG
CGTGTGGTCT CTGTTGATGC GGGTCAGCCC CAGCCTGAGA ACTGGCAAGA TTTTATTGCC
CAAACCGACA ACGTATTAGA CGTATCTACC GGCGGCGGAT ACATTTTTGC CAGCTACATG
GTGGACGCTA TTTCAAATGT GAAGCAGCTT GATATGAGCG GTAAGTTGGT GCGAGAAATC
GCATTACCAG GGGTCGGCAC TGCCAGTGGA TTTGATGGCA AAAAAGACCA ACAAACTCTT
TACTATAGCT TCACCAACTA CAAAACGCCG AGCACGATCT TTAGCCTCAA TGTAGAAAGC
GGCGAATCAT CGGTGTATTT AAAGTCGAAA GCGAATTTTG ATAGCGACGC TTACGAATCT
AAACAGGTCT TTTACACGTC TAAAGACGGC ACCAAAGTCC CCATGATCAT TACCCATAAA
AAAGGCCTAA AACTGGATGG CACCAACCCA ACTATGCTCT ATGGCTACGG CGGTTTTAAC
ATAAGCTTGC AACCCGCTTT CAGTAGTGTC AATGCTGCAT GGCTTGAGCA AGGAGGAGTG
TATGCGGTAC CTAATTTGCG CGGCGGCGGT GAATACGGTA AAGCCTGGCA TGACGCTGGC
ACAAAATTGC AAAAGCAAAA TGTGTTTGAT GACTTCATCG CGGCAGCCGA GTATTTAATT
GAGCAAAACT ACACTAGCCC TGATTACTTG GCGATCCGCG GCGGTTCAAA TGGTGGTTTA
TTGGTAGGTG CCACTATGCT TCAACGCCCA GACTTATTTA AAGTTGCCCT GCCTGCTGTA
GGTGTGCTGG ACATGCTGCG TTATCATACC TTTACTGCTG GCGCTGGCTG GGCTTACGAT
TACGGCACCT CAGAAGACAG CCAAGAAATG TTTGATTACT TGATGACCTA CTCACCGGTG
CAAAACGTGC GAGAAGGCGT TAACTACCCT GCCACACTGA TTACAACAGG CGATCATGAT
GATCGCGTCG TGCCCGCTCA TTCGTTTAAG TTTGCCGCCC AGCTGCAAGC CAAAAATACC
GGCCCTAACC CGATGTTGAT CCGTATCGAA ACCAATGCTG GTCACGGTGC AGGTACGCCT
ATCAGCAAAA CCATAGAGCA GTACGCCGAC ATCTTTGGGT TTACCCTCTA CAACATGGGT
ATTAAGGTGC AATAA
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| Protein sequence | MKLTLIAVSI SAMLMGCSNA NHSANQTPAT MKTSITSNQL QEMNLSYPKT QKGDVIDTYF
GKQVADPYRW LEDDMSSETE QWVKAENAVT QAYLAQVPSR DKLKERLKVL LDYEKVGAPF
KEGKYTYFFK NDGLQNQAVL YRQLDDGEAQ VFLDPNSFSD DGTTSLASID FSKDGSLVTY
LISEGGSDWR KAITIDVETM QPVSETLKDI KFSGISWLGN EGFYYSSYDK PEGSELSAKT
DQHKLYFHRL NDKQTQDTLV FGGTDEQKNR YVSGQVTEDN RYLLISAAVS TSGNKLYLKD
LSEPDSPLVT ILENTDSDTN LLDNEGSTLL FVTNLDAPNK RVVSVDAGQP QPENWQDFIA
QTDNVLDVST GGGYIFASYM VDAISNVKQL DMSGKLVREI ALPGVGTASG FDGKKDQQTL
YYSFTNYKTP STIFSLNVES GESSVYLKSK ANFDSDAYES KQVFYTSKDG TKVPMIITHK
KGLKLDGTNP TMLYGYGGFN ISLQPAFSSV NAAWLEQGGV YAVPNLRGGG EYGKAWHDAG
TKLQKQNVFD DFIAAAEYLI EQNYTSPDYL AIRGGSNGGL LVGATMLQRP DLFKVALPAV
GVLDMLRYHT FTAGAGWAYD YGTSEDSQEM FDYLMTYSPV QNVREGVNYP ATLITTGDHD
DRVVPAHSFK FAAQLQAKNT GPNPMLIRIE TNAGHGAGTP ISKTIEQYAD IFGFTLYNMG
IKVQ
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