| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2779 |
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| Symbol | |
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| ID | 4174539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3372302 |
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| End bp | 3373210 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055796 |
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| Product | alpha-L-glutamate ligase |
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| Protein accession | YP_662344 |
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| Protein GI | 109899089 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000513891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATCG CGATTTTATC TCGCAACAAG AAACTGTACT CAACTCGTCG TTTACAAGAA
GCTGCTTTGG CCCGCGGCCA CGAAGTCGAC ATCATAGATA CGTTGCATTG TTATATGGAT
ATTTCAAGCA ACAAGCCCTC TGTGCGCTTT AAAGGTGAAC CTTTACCTCA ATACGATGCC
ATTATTCCAC GTATCGGAGC GTCGATAACG TTCTATGGCA CGGCAGTCGT GCGTCAGTTT
GAAATGATGG GCAGTTTTAG TGTCAACGAA TCTGTCGCTA TCAGCCGTTC ACGAGATAAA
TTACGTTCAA TGCAGTTACT GTCACGCAAA GGTATCGGTC TGCCGCGTAC GGGGTTTGCT
CACAGCCCAG ATAACATCAA AGATTTGATT GCCAATGTCG GTGGCGCGCC GGTCGTGATT
AAATTGCTTG AAGGCACGCA AGGTATAGGC GTGGTATTAG CAGATACCAA CAAAGCTGCA
GAAAGTATTG TTGAAGCCTT TATGGGTATA AAAGCCAACA TTTTAGTACA GGAATACATT
AAAGAAGCGG GCGGTGCCGA TATACGCTGT TTCGTGGTGG GCGGTAAAGT GGTTGCTGCC
ATGAAGCGCC AAGGCGCACC GGGGGAGTTT CGTTCTAACT TGCACCGAGG TGGCAGCGCG
GCTTTGGTTA AATTGACGGC GGTTGAACGA GCAACGGCTG TCTCTGCTGC TGGCGCGATG
GGCCTAAACG TGTGTGGTGT TGATTTACTG CGCTCAAGTC ATGGCCCTGT TGTCATGGAA
GTTAACTCTT CCCCCGGCCT TGAAGGAATT GAAGCAGCAA CTTCAAAAGA TGTGGCCAAC
ATGATCATTG AATTTATAGA GAACAAAAAA TCTAAGCCAC ACAGCACCAA GACTCGAGGT
AACGGTTAA
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| Protein sequence | MKIAILSRNK KLYSTRRLQE AALARGHEVD IIDTLHCYMD ISSNKPSVRF KGEPLPQYDA
IIPRIGASIT FYGTAVVRQF EMMGSFSVNE SVAISRSRDK LRSMQLLSRK GIGLPRTGFA
HSPDNIKDLI ANVGGAPVVI KLLEGTQGIG VVLADTNKAA ESIVEAFMGI KANILVQEYI
KEAGGADIRC FVVGGKVVAA MKRQGAPGEF RSNLHRGGSA ALVKLTAVER ATAVSAAGAM
GLNVCGVDLL RSSHGPVVME VNSSPGLEGI EAATSKDVAN MIIEFIENKK SKPHSTKTRG
NG
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