| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2778 |
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| Symbol | |
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| ID | 4174538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3371259 |
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| End bp | 3372299 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638055795 |
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| Product | succinylglutamate desuccinylase/aspartoacylase |
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| Protein accession | YP_662343 |
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| Protein GI | 109899088 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3608] Predicted deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000135015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAAAG CAGCCCCATT AAAGATCGGC GATAACATTA TTGAGCCGGG CACGCGTACT
AAGCTACAGC TGTCTGCTGC ACGCTTGTAC ACAGATACCG ATATGTCTAT TCCGGTTGAA
GTGATTCGGG CTAAAAAGGA AGGGCCCACT GTGTTTATCA GTGCTGCCAT TCACGGTGAT
GAACTAAACG GGATCGAGAT AGTACGTCGC GTGCTAGATT CCCCATCATT TAAATTGATT
GCAGGCACGG TGATCGCAGT GCCTATGGTG AATGTGTATG GCATGTTGAT GCAAAGCCGT
TACATGCCAG ACCGGCGCGA TTTAAACCGC AGCTTTCCTG GCTCGCCAAA TGGTTCGTTG
ACTTCGCGCT TGGCGCATAT GTTTTTAACG GAAATCGCAG CTAAGTGCGA ATATGGCATT
GATTTACATA CCGGGGCGAT TCATCGCAGT AATTTGCCGC AAATCCGAGC CAATTTAAAG
GACCCGAAAA CGGCCGAGTT AGCCCATGCG TTTGGCGTAC CCGTATTGCT TAACTCAGAC
TTGCGGGATG GTTCACTGCG CCAAGCAGCG GATGAAACAG GGACTAAAAT CTTATTGTAT
GAGGCAGGTG AAGCATTGCG TTTTGATGAA TTGTCTATAC GCGCTGGGGT CAAGGGCATT
TTCAATGTGT TGGCGTCGCT AGGTGTGGTA TCAAAACGTC GTCGTACGTT GCCTAAAATT
GAGCCGCTGG TGGCTTATAA AAGTTCTTGG TTACGGGCGC CTGAAAGCGG CATAGTGCGG
GATCGTAAAA GCTTAGGTGA TTATGTGAAA CGCGGCGATG TGCTTGCAGA TGTATGCAGC
CCAACGGGCA CCTACAGCGA GCCTCTAATA GCTAATCGCT CCGGGATCAT CATTGGTAAG
CAGAATATTC CTTTGGTGCA AGAAGGGGAT GCTATGTTCC ATATTGCCTT GTTTGACGAC
CCCAAAGATG TGGTGGATAA CATGGACCAA TTGCAGGAAA ACTTAATGCC GGATATCGAC
CCACAAAGTG CGCCAGTGTA A
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| Protein sequence | MVKAAPLKIG DNIIEPGTRT KLQLSAARLY TDTDMSIPVE VIRAKKEGPT VFISAAIHGD
ELNGIEIVRR VLDSPSFKLI AGTVIAVPMV NVYGMLMQSR YMPDRRDLNR SFPGSPNGSL
TSRLAHMFLT EIAAKCEYGI DLHTGAIHRS NLPQIRANLK DPKTAELAHA FGVPVLLNSD
LRDGSLRQAA DETGTKILLY EAGEALRFDE LSIRAGVKGI FNVLASLGVV SKRRRTLPKI
EPLVAYKSSW LRAPESGIVR DRKSLGDYVK RGDVLADVCS PTGTYSEPLI ANRSGIIIGK
QNIPLVQEGD AMFHIALFDD PKDVVDNMDQ LQENLMPDID PQSAPV
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