Gene Patl_2772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2772 
Symbol 
ID4174532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp3364846 
End bp3365520 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content43% 
IMG OID638055789 
Productnitroreductase 
Protein accessionYP_662337 
Protein GI109899082 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAA GCATCTCACT TAATACGCCA CTTCATACGC CACTTAATAC ATCACTGAAT 
GACGCCCTTA ATTGGCGCTA TGCAGTGAAT AAGTTTGCGC ACAGCATCTT GAGTTCAGAG 
CAACTAAACC ATTTAATTGA AAGTGTCCGT TTAGCGCCTT CTGCTTATGG AATACAGCCT 
TACCAACTTC TGGTGATCAG CAACCCAGAA ACAAAACAAG CTTGTTTACC TTTCAGTTAT 
GGTCAAGACA AAGTCGCAAA ATGTTCGCAT CTATTGGTAC TTGCCCATAA AACAAACGTC 
ACCCAGCAAG ACATTGCCCA CTTTATTGAG CAACTGGCAA AAACGCAAAA TAAGACGGCT 
CACCAGTTAT CGACTTATCA AACGCAAATT CAGGCTGACT TATTATCCCG TTCATCTGAG 
GAACAAAATA ATTGGGCACA ACAACAAACG TATATCGCAC TTGGCATATT ACTCGCCAGT 
GCGGCAGCCA GTTTTATTGA TGCATGCCCT ATGACTGGTT TTGAAGTCGA TGGCATTAAC 
GAGGTGCTGC AATTAAACCA AAAAGGTTTA AGTGCAGCGG TGTTATGCCC AGTGGGCATA 
CGGGCCGAGA ATGACGTTTC AGCACAGCGT ACTAAACACC GCATTAGCCA GGATCAACTT 
GTAGTAAACC TATGA
 
Protein sequence
MSQSISLNTP LHTPLNTSLN DALNWRYAVN KFAHSILSSE QLNHLIESVR LAPSAYGIQP 
YQLLVISNPE TKQACLPFSY GQDKVAKCSH LLVLAHKTNV TQQDIAHFIE QLAKTQNKTA 
HQLSTYQTQI QADLLSRSSE EQNNWAQQQT YIALGILLAS AAASFIDACP MTGFEVDGIN 
EVLQLNQKGL SAAVLCPVGI RAENDVSAQR TKHRISQDQL VVNL