| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2768 |
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| Symbol | |
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| ID | 4174528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3361380 |
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| End bp | 3362153 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055785 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_662333 |
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| Protein GI | 109899078 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCATTCG ATTCTCAATT CGCTTCGCTC AATCAAACCA AGTTAAATGA AGAGTCACCT
ACCCCCCTTT ACTTCCAACT TTACAGTTTA CTTAAGCAAA ATATCTTAAA CGGCAGCTTA
GAAGATGGCT CCCAGTTACC CACTGAACTG GGATTGTCAC AGGCATTCAG CATTTCTCGG
ATCACCGCTA AACGCGCGCT AGACGAACTT GCCGCTGAAG GCTTAGTGGC AAGACGCCGA
GCAAAAGGCA CCCATGTCAC CCACAAATAT CAGCCTAAGC CAGTGAAAGC GCCATTAGTA
GGCATGTTGC AAGAATTGGA ATTTATGGGC CAACATTCAG AAGCCAAAGT GGTTGAACTC
ACTACAGCTC GCCCACCTGC GGATATTGCA GAAGAATTTG CACTGGTTGA AGGTGAAACC
CTATTGAAAA TGACCCGAGT GCGTAGCCGT TTGCATGAAG CCTTCGGCTA TTATGTGAGT
TGGAGTAAAG GGCTAAATAA GTTCAATGAA AAAGCCAGCT TAGAGTCGAC AACACGACTG
GAAATCTTTC GTAAGAATGG TATTGAACTC AAGCATGTAA AGCAGATTTT AAGTGCCTCT
GCCGCTACCC CAGAGGTCGC AAAAGAGCTA GGGGTTGAGC CTGGCTTTCC ACTATTGAGT
TTGACCCGCC GTTCGTATGA TGAGAACGAA AATCTAGTGG ATTATTTGTC TGCGCTGTAT
CACCCAGACC GCTTTCAGTA CCGAATGGAT TTGACGCCAG AGCCAGCAAG TTAG
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| Protein sequence | MSFDSQFASL NQTKLNEESP TPLYFQLYSL LKQNILNGSL EDGSQLPTEL GLSQAFSISR
ITAKRALDEL AAEGLVARRR AKGTHVTHKY QPKPVKAPLV GMLQELEFMG QHSEAKVVEL
TTARPPADIA EEFALVEGET LLKMTRVRSR LHEAFGYYVS WSKGLNKFNE KASLESTTRL
EIFRKNGIEL KHVKQILSAS AATPEVAKEL GVEPGFPLLS LTRRSYDENE NLVDYLSALY
HPDRFQYRMD LTPEPAS
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