| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2765 |
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| Symbol | |
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| ID | 4174525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3357216 |
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| End bp | 3358619 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638055782 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_662330 |
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| Protein GI | 109899075 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAA CGTTATTTGA AAAAATCTGG CAGCATCACC TTGTTGAAGA GCTTGATGAT
GGCGCTGCAT TGATTTATAT CGACCGAGTA TTTTTACATG AGCGCACAGG CTCTATCGCC
CTGAAAAGTT TAGAGGCTGA TAACCGACAA GTGGTGTCCC CTGAACATGT ATTTTGCACC
ATGGATCATA TTGTTGACAC TATGGTAGGG CGAGACGACA ACACTAAGGT GCCCAGCGGT
AAAAACTTTA TTCTCGCCAC CCGTGAAGCG TGCATTGATG CCAACATTAA GCTGTTTGAT
GTGAATGACC CACAGCAAGG CATTGTACAT GTGGTATCTC CAGAGCTGGG TATAGTGCAA
CCAGGCGCAA CCTTGGTGTG CCCCGACAGC CACACGTGCT CACAAGGGGC ATTAGGGGCG
TTAGCGTGGG GTATTGGTTC AAGCGAAGCA GAACATGCAC TTGCGACCAA AACCTTGCGG
GTAAGTAAAC CCAAAACCAT GAGGGTGAAC TTTCATGGCG AGATGGGGTT TGGGGTCAGT
GCTAAAGACA TGATTTTGCA CTTGATTGGC ACGTACGGTG CCGCTGGTGG GGCTGGGTAT
GTGATTGAAT TTGCCGGCAG TGCGGTGGAA GCGCTTGAGA TAGAAGGGCG CTTGACCCTA
TGTAATATGG CCGTAGAGTT CTCTGCATTC AGTGGCCTAG TTGCCCCTGA TGAAAAAGCG
ATTACCTACC TCAAAGGGCG TGAGTACGCC CCCAAAGGTG AGTTATGGCA GCAAGCGGTC
ACATATTGGC AATCATTGTT CAGTGATGAA CAAGCGCAGT TTGATAAAAC GATAGAGATA
GATTGTGCGG ATATTAGCCC AACCATTACT TGGGGCAACA GCCCCCAGCA CGCATGTTCA
GTGAACTCAC GGGTACCCAG CGCCCAAGCG GATGCTACTC AAAATCAACT TAAAGCGTTG
AAGCGGGCAT ATGAGTATAT GGACGTGCAA CCCGGCTCTG CGCTCAAAGG CTTGCCAATT
GGCGCGGCAT TTATTGGGTC GTGTACCAAC AGTCGAATAT CAGACTTGCG CTTGGCAGCC
AAGGTACTGA AAGGTCGAAA AGTCGCGGAC AACGTCAACG CGATTTGTGT GCCTGGCTCA
ACTACCGTTA AACGCCAAGC TGAAGCAGAA GGTCTCGATA AGATATTCAT TGCTGCTGGG
TTTGAATGGC GTGAGGCAGG TTGCTCCATG TGTTTCTTTG CGGGTGGCGA AAGCTTTGGC
TATCGCCAGC GTGTGGTAAC CAGTACCAAT CGTAATTTTG AAAGCAGGCA AGGGCCCGAA
ACCCGCTCGC ACCTTGCAAG CCCTGCGACG GTTGCTGCCT CTGCTATCGC AGGGTGTATT
GCTGATGTAA GGGAGTATTT GTAA
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| Protein sequence | MDRTLFEKIW QHHLVEELDD GAALIYIDRV FLHERTGSIA LKSLEADNRQ VVSPEHVFCT
MDHIVDTMVG RDDNTKVPSG KNFILATREA CIDANIKLFD VNDPQQGIVH VVSPELGIVQ
PGATLVCPDS HTCSQGALGA LAWGIGSSEA EHALATKTLR VSKPKTMRVN FHGEMGFGVS
AKDMILHLIG TYGAAGGAGY VIEFAGSAVE ALEIEGRLTL CNMAVEFSAF SGLVAPDEKA
ITYLKGREYA PKGELWQQAV TYWQSLFSDE QAQFDKTIEI DCADISPTIT WGNSPQHACS
VNSRVPSAQA DATQNQLKAL KRAYEYMDVQ PGSALKGLPI GAAFIGSCTN SRISDLRLAA
KVLKGRKVAD NVNAICVPGS TTVKRQAEAE GLDKIFIAAG FEWREAGCSM CFFAGGESFG
YRQRVVTSTN RNFESRQGPE TRSHLASPAT VAASAIAGCI ADVREYL
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