| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2763 |
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| Symbol | |
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| ID | 4174523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3355078 |
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| End bp | 3356277 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055780 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_662328 |
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| Protein GI | 109899073 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATT CAGTTATGCC GAATGCAGGA AGATTGCCGT TAACGGGCAT TAAAGTAGTT
GAGTTTACGC ACATGGTAAT GGGGCCGACC GCTGGGGTTA TTCTGGCCGA CTTGGGCGCT
GAAGTAATAA AAATTGAGCC ACTCACTGGC GACAATACCC GTCGCTTAAA GGGCTCAGGC
GCAGGTTATT TCTCCATGTA TAACCGCAAT AAACAGAGCG TATGTATAGA TATAAAAAGC
CCCGAAGGGA AAGATGTCGC GTTATCTTTG CTTGAAGAGG CTGACATTTT ACTAGAAAAT
TTTCGCCCTG GCGCAATGGA CAAATTAGGC CTGGGGTATG AGCAACTGAA AACCATTAAC
CCACGCCTGA TTTACTGTTC GCTTAAAGGG TTTTTAAGTG GTCCTTATGC TCATCGCACA
GCGCTGGACG AAGTCACGCA AATGATGGGC GGCTTAGCGT ACATGACAGG TCTGCCCGAT
AAACCCATGC GCGCAGGCTC ATCGGTAATT GATATCACCG GCGGTATGTT TGGTGTCATT
GGTATTTTGG CCGCCCTTGA AGAGCGCCAT CACACCCATG AAGGTAAAAA TGTCACCTGC
TCGCTGTATG AAACCACCGC ATTTATGGTC GGCCAGCATA TGGCACAGCA AGCGGTCACA
GGGGAAGCGC CGCCGCCGAT GTCGGTGCGT CGCTCAGCTT GGGCCATTTA CGATATATTT
CATTGCGCGA ATGATGAACA GGTTTTTATT GGTGTGGTGA GCGATACTCA GTGGCGCATT
TTTTGTGATG CATTTGGCTT ACAGGAGTTT GCGCTTGATC AGACTCTTGC GCTTAACAAT
GGTCGTGTGG CACAGCGTGA ACGTATTTTA CCCGTTATTA ACGCGGTATT CGCCACACTA
AGTAAAGCCG AGCTAATGGC CAAATTGGAA AAATCCGGTT TGCCTTTCGC CCCTATTAAT
AAACCATCAG ATTTATTTGA CGACCCTCAC TTAAATGCAG GTGGATTAGT TGATGTCACC
CTGCCAGATG GTGTTAGAAC TAAACTGCCG GGATTACCCC TGGAAATGAA CAATGAACGC
ATGCCATTGC GTCACGACAT TCCTACCGAC AAAGGCAATT CTGTCGCCAC GTTAAAAGAC
GCGGGCTTCA GTGATGAGGA TATTAAGAAA TTACTCGCCC TAGGCGTAGT GCGCGCTTAA
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| Protein sequence | MTNSVMPNAG RLPLTGIKVV EFTHMVMGPT AGVILADLGA EVIKIEPLTG DNTRRLKGSG
AGYFSMYNRN KQSVCIDIKS PEGKDVALSL LEEADILLEN FRPGAMDKLG LGYEQLKTIN
PRLIYCSLKG FLSGPYAHRT ALDEVTQMMG GLAYMTGLPD KPMRAGSSVI DITGGMFGVI
GILAALEERH HTHEGKNVTC SLYETTAFMV GQHMAQQAVT GEAPPPMSVR RSAWAIYDIF
HCANDEQVFI GVVSDTQWRI FCDAFGLQEF ALDQTLALNN GRVAQRERIL PVINAVFATL
SKAELMAKLE KSGLPFAPIN KPSDLFDDPH LNAGGLVDVT LPDGVRTKLP GLPLEMNNER
MPLRHDIPTD KGNSVATLKD AGFSDEDIKK LLALGVVRA
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