| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2761 |
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| Symbol | |
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| ID | 4174521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3353124 |
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| End bp | 3353690 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055778 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_662326 |
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| Protein GI | 109899071 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACGTT TATCAGCGCT ATCAATTAGC GAGTTGCCTA ATGATCTTAG CGCCATCATG
TCGGCGGGTG AAGACATCAT GGGTTTTACC CCGAATGATG GTTTGATCAT GGCGCGAAGC
CCTGAAATGC TGAAAGCATT TTTAGGGTTA GTGCAGTCAA TTTACCAACC AAGTGCGTTA
GATAATGACC TGAAAAAGTT GCTTGGCTTA ATGACCAGCA GTGCTAGCGG TTGTCAGTAT
TGTCAGGCGC ATACGCAATA TGGCGCGTTG AAACATGGTA TCACCGAGCA AAAAGTCGCT
GCCATTTGGG AATACCAAAC CAGTGACTTG TTTAGCCTTG CTGAGCGTGA AGCACTCGAT
ATTGCGCGCA ATGCTGCTTT GGTGCCAAAC GCAGTCACCG ACGAGCAGTT TGAACGCCTT
AAATTGTATT TTAGCGAGGT GCAAATAGTG GAAATAATCG GCGTGATTTC ATTGTTTGGC
TTTCTGAATC GCTGGAACGC CACGTTTAAA ACAGATATCG AAGCAGCTCC TGCAATGGCA
AGTGCAAAGT TCACTAGCGT CGGTTGA
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| Protein sequence | MSRLSALSIS ELPNDLSAIM SAGEDIMGFT PNDGLIMARS PEMLKAFLGL VQSIYQPSAL
DNDLKKLLGL MTSSASGCQY CQAHTQYGAL KHGITEQKVA AIWEYQTSDL FSLAEREALD
IARNAALVPN AVTDEQFERL KLYFSEVQIV EIIGVISLFG FLNRWNATFK TDIEAAPAMA
SAKFTSVG
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