Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2744 |
Symbol | |
ID | 4174504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3336143 |
End bp | 3337351 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638055761 |
Product | transposase, IS4 |
Protein accession | YP_662309 |
Protein GI | 109899054 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGATA TTCATATCTT ACACGATTTG CTTAAAAAAC AATGTCCTAA TCTACATGCA AAACGCCTTT CCTCTTTGAT GGTTGCCACA CAATCTTTGC TAGATGGTCA GCAACTGTCG TTGACCGAAT TAGGACGCAA TATCTCAGGC TCCGTGGCCC CGAAACACAA CATTAAACGC ATCGACAGGC TGCTTGGTAA TAACAACCTA CATAATGAAC GGCTCGACAT CTACCGTTGG CACGCTCGCT TGCTTTGCGG TGCTAACCCC ATGCCGGTTG TTCTTGTGGA TTGGTCTGAT GTGCGTGAGC AGCTCAGGCA TTTAACCTTA CGTGCATCGG TCAGTGTTCA GGGGCGCTCT GTCACGCTTT ATGAGCGCGT ATTTTCATTC GGTGAATACA ATTCACCTGT TAGTCATAAT CCGTTTTTAC GGGAGTTGGC GAGTATCCTG CCGTCGGGTT GTTGCCCGTT GATTGTGACC GATGCAGGCT ATCGTAACCC TTGGTTTCGT GAAGTCGAAA AGCATGGATG GTTCTGGCTA GGCCGAGTGC GCGGTGATGT GGGATTTAAG CGTGATGGGC AAGCATCATG GCAAAGTAAT AAGTCGTTTT ATCCCAGTGC AAATTCTCGG GCCAAATACC TTGGGTGTGG GCAATTAGGG CGTAAAAGCC CGCTTCATGC ACACCTGCAT TTGTACAAAG CAAAGGCCAA ACATCGAAAG GACAACCGTT CTTCAAAGGC AGGTCGAAAC CACACCGCCC AGCAAAGCTA TCGTGCCGGT AGCAAAGAGC CTTGGCTACT CGCCACTAAC CTTCCCGAGA ACGATAAACT TAACTCAAAA CAGCTGGTTT CCCTTTACGC AAGACGGATG CAAATAGAAG AAACCTTCCG CGATATTAAA AGCCCTCAAT ACGGAATGGG ACTGCGCCAC AGCAACAGTC GCTGTACCAA ACGATTCGAC ATATTACTGC TGATAGCGAT GCTCGCAGAA TGGCTATTAC GGTTACTCGG TATCATTGCT CAAAAACAAA ATTGGGAAAG AGCATTTCAA GCTAACACCA TCCGTCATCG GCGCGTGTTA TCTATCATTA GGCTAGGCAG AGAAGTCAGG AAAAGGGCAA AAGATTACAG GATGAACTCA GCTCAAATGA CATGGGCTAT CGCCCAATAT ATTACCTGGG TTCACAAAGA AGGGAGACCA ATTCTATGA
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Protein sequence | MRDIHILHDL LKKQCPNLHA KRLSSLMVAT QSLLDGQQLS LTELGRNISG SVAPKHNIKR IDRLLGNNNL HNERLDIYRW HARLLCGANP MPVVLVDWSD VREQLRHLTL RASVSVQGRS VTLYERVFSF GEYNSPVSHN PFLRELASIL PSGCCPLIVT DAGYRNPWFR EVEKHGWFWL GRVRGDVGFK RDGQASWQSN KSFYPSANSR AKYLGCGQLG RKSPLHAHLH LYKAKAKHRK DNRSSKAGRN HTAQQSYRAG SKEPWLLATN LPENDKLNSK QLVSLYARRM QIEETFRDIK SPQYGMGLRH SNSRCTKRFD ILLLIAMLAE WLLRLLGIIA QKQNWERAFQ ANTIRHRRVL SIIRLGREVR KRAKDYRMNS AQMTWAIAQY ITWVHKEGRP IL
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