Gene Patl_2742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2742 
Symbol 
ID4174502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3334527 
End bp3335096 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content38% 
IMG OID638055759 
Producthypothetical protein 
Protein accessionYP_662307 
Protein GI109899052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATATC GCAACGGAAA TTATTCAGCG TTTTACGTCA GTGAGCCATT CACTGAAGGT 
GGTCTAGGCG CTCATGCAAC TAAAGATTTT GTAAGCTACA GCATGCTTAG AGCATGGAAA
GGAAAGGATT CAGACTTTCC ATTTAATGAT TCCCACAATA AAAACTACAA TGTAAGGGAC
GGCAGTGATT GGGACAAAAC TTTAAAACCG AGAATTAGAG AGCGACTCAG TAAATCTAAG
AATATAATAT TATTCTTAAG CTCTGTGACA AAAAGTTCCA AAGCGATTCG TGAAGAAATT
GACTACGGAA TAAATACATT GGGCTTGCCG GTTATTGTTG TATATCCAGA GTACACGGAA
AAATCTGATA TTATTAACTG CCAATCAAAA ACGTTCAAAA AGCAGATAAA GGATCTTTGG
GATAAATTGC CAAAGTTTCG AGACTCAATG GATTCAGTGC CCACTCTACA TATCCCAAAC
AAAAAAGCAC TGATCGAAAA GTCGCTTAAG GATACTGACT TTATGGTGAA TACAAAAAAG
GATGCAGCCA AGTCTTTTTA TCCGTGTTAA
 
Protein sequence
MAYRNGNYSA FYVSEPFTEG GLGAHATKDF VSYSMLRAWK GKDSDFPFND SHNKNYNVRD 
GSDWDKTLKP RIRERLSKSK NIILFLSSVT KSSKAIREEI DYGINTLGLP VIVVYPEYTE
KSDIINCQSK TFKKQIKDLW DKLPKFRDSM DSVPTLHIPN KKALIEKSLK DTDFMVNTKK
DAAKSFYPC