| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2725 |
|---|
| Symbol | |
|---|
| ID | 4174485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3316948 |
|---|
| End bp | 3319122 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638055742 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_662290 |
|---|
| Protein GI | 109899035 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0744828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGTT TTTTTGCATG TCTAATATTG ATGACCTCTT TCAATATCAA GGCAGTAGAT
GAGCAACCAA AAAACATCGT TATTATTCTG GCTGATGATC TTGGTTGGAA TGACACAACT
ATATTTCAAC CGAGTCAATT TTTAGAAACA CCTAATATCA ATGCACTTGC GGCGAAAGGC
ATGATTTTCA GCCAGGCTTA CGCTAATAGT CCACTGTGCT CTCCTACTCG CGCTACTCTA
CTTACCGGGC AAACACCGGC GCGTCATGGC TCAACTGCAC CAAGTCATCA TTTGCCTGTC
GTGAGGTTAA TGCCTTCATT ACCAGCTTCC GCGGCTACAA ATAGAAAGTC TATTGCGCCA
CAAACGGTTA CACGTCTTGA CACAGCATTA CCTACTCTAT CTTCTATAGC AAAGGCCAAC
GGCTATCACA CAGCACACTT CGGTAAATGG CATCTTGGGG CGCACCCTTA TAGTCCTTCG
GAGCACGGTT TTGATATAGA TATACCTAAT TTTCAAGGAG CCGGCCCCAC CGGCGGGTAT
CTTGCTCCTT GGTCATTCGC GCCCGATATT CAGCCACAAA TTGCGGGTGA ACATATCGAT
ATTCGACTCG CCAAAGAGGC AAAAAAATGG ATATTTAGTG TGAAAGATGA TGGCCCCTTC
TTTTTAAATT TTTGGGCCTT TTCGGTTCAT GCTCCATTTA ATGCAGACGC TGACGAGATC
GATTATTTTA TCAATAAGCG CTCTGGATTT CATAGTCAAC GTAATGCCAC TTATGCGGCG
ATGGTGAAGC AATTCGATGA CGCTATTGGT GTCTTGTGGC AAGCCTTGGT AGAAGCGAAA
GTAGAAAAAA ATACCATTAT TATTTTCACC TCAGACAATG GTGGCAATAT GTATACTGTT
GTAGGAAACA CACATGCAAC GAGTAACTTT CCTCTGAAAG GAGGTAAGGC CACTGAATAT
GAAGGAGGCT TAAAAGTGCC TACGGCGGTT ATTTGGCCGG GTCTTACACA GCCGAATACG
TTGAGTAATA CACCTATTCA AACGGCAGAT TTCTTTCCTA CGTTACTCAA TGGAGTTAAC
TTGTCGTGGC CATCAACTCA TATTGTTGAT GGTCGAGATA TTCGGCCAGT TTTACAAGGT
GGTACCTTAG AGACGCGTGC TATTTTTACT TATTATCCGG CTGAGCCAAA AGTGCCAGAT
TGGCTCCCAC CCTCGGCCAC TGTTACCTTA GATGGTTGGA AATTGATCCG TACGTTTCAT
TACGGTAAAT CTGGGACCCA TCTTTATAAA CTTTATAATC TTAATCTTGA TCCCTCTGAG
TCTACTAATT TAGCTAACAC TCAGATTCAC AAAGTAAGTG AACTTGACGC ACTTCTAGAG
GCGTATTTAC TAGAAAGTGA AGCGGTAATT CCGATCGTTA ATACTGGTTA TCGCGATGGT
ACTTTTAATT ACAATACCAT CGGAGTAGAA AAGGAAAGCT ATCAATTACC GGAAGAAAAA
ATTTATTCTG ACATTCACTT TCAAATTAAA ACTGATCAGC ACGTCATTGA TGGGGGGGAT
ACGGCAAAAT TCGTATATCA ATTAAGTCAC CATAGTAATA ACGCGTCAGT CGCCTATAAA
CAATTTATGG GTCCAGCAGT TACGTTAGCT GCGGATGGAA ATAGCATAAG CTTCGTAGCG
CCAGAGGTGA CTCAGGCAGA GTATGTGGGT TTAGCGTTTA TTGTTAAGGA TCAAGATAAA
ACGATTAGGA AGCAAATTGG GGTGCGTATT AATCCAACCC AAGTTGCTCC TAGTTTAACC
ATCTCTCAAG TTACGCAGAG CATTGAAAAA GGAAGTACGG CTAGTTTTAA CATTGAAGCC
ATCGATCTCA ATAAAGATTT TATTCATATG AGTGTCTCAA GCGACAATTT ACTCTCGAAC
TCCTTAGGTC AACCGCCAAC GGTGGGCGAA TTTCAGGTAA ACATTCCACC GGATTACTCA
GATACGTCAA TCACATTATT GTTTACTGCT GATGACCTTC ATCAGCAGGT TTCGCAAGCC
ATTACATTGA ATGTTTCACC GGTTAAATCT AGCACGGATA ACGTTCAAGC CACCTCAAGT
GCCGCGGGAA GCGTGCACTA TGTTATGTTA TTTTCTATTC TTTTTATCAT ATTGCTACGC
AGACATTTGG AATAA
|
|---|
| Protein sequence | MLRFFACLIL MTSFNIKAVD EQPKNIVIIL ADDLGWNDTT IFQPSQFLET PNINALAAKG
MIFSQAYANS PLCSPTRATL LTGQTPARHG STAPSHHLPV VRLMPSLPAS AATNRKSIAP
QTVTRLDTAL PTLSSIAKAN GYHTAHFGKW HLGAHPYSPS EHGFDIDIPN FQGAGPTGGY
LAPWSFAPDI QPQIAGEHID IRLAKEAKKW IFSVKDDGPF FLNFWAFSVH APFNADADEI
DYFINKRSGF HSQRNATYAA MVKQFDDAIG VLWQALVEAK VEKNTIIIFT SDNGGNMYTV
VGNTHATSNF PLKGGKATEY EGGLKVPTAV IWPGLTQPNT LSNTPIQTAD FFPTLLNGVN
LSWPSTHIVD GRDIRPVLQG GTLETRAIFT YYPAEPKVPD WLPPSATVTL DGWKLIRTFH
YGKSGTHLYK LYNLNLDPSE STNLANTQIH KVSELDALLE AYLLESEAVI PIVNTGYRDG
TFNYNTIGVE KESYQLPEEK IYSDIHFQIK TDQHVIDGGD TAKFVYQLSH HSNNASVAYK
QFMGPAVTLA ADGNSISFVA PEVTQAEYVG LAFIVKDQDK TIRKQIGVRI NPTQVAPSLT
ISQVTQSIEK GSTASFNIEA IDLNKDFIHM SVSSDNLLSN SLGQPPTVGE FQVNIPPDYS
DTSITLLFTA DDLHQQVSQA ITLNVSPVKS STDNVQATSS AAGSVHYVML FSILFIILLR
RHLE
|
|---|
| |