| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2711 |
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| Symbol | |
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| ID | 4174471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3302821 |
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| End bp | 3305109 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055729 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_662277 |
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| Protein GI | 109899022 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.882237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGC ATTACAGTCG CAGCAAATTA GCGCAAATGA TTACGTTAGC CCTAGTGGCA
CCATTTGTCG CCGCGCCACT CGGGGCCTTC GCCCAAGAGG TCGCGCCAGA TACTGAAACC
GAATTTAATA AAGAGGCGAT TGAGTTAATT GAGGTAACTT CTCGTTATCG TAAAGAAACG
CTTAACAAAA TTCCTATTTC TGTAACGACT TTCAATGCGG ATGACATTGA AAAAGGTGGC
CTGCAAAACA TTAATGATAT TGCCGTTAGT GCAGTGGGTA TGTCCATGGA GAAAACCTTT
GGTCGTCAAT CTGATATTCC GGTGATACGT GGCGTATCGT GGATCCCAGG GTTCGGTTCA
CAAAAAGCCT CCTATTTTAT TGATGGCGTA TATTTTGGTG GTTCGATTCA AAGCTTGCCT
CTAGATTTGA TTGAGCGGGT AGAGATTGTT AAAGGGCCGC AAAGTGCTCA ATATGGTCGC
CGTACCTTTT CTGGCGCTAT CAACTTCATT ACTCGCAAGC CAGCGGATGA ATTATCAGGC
TATGTTAATT TAACCTTGGG CCAAAACGGT AACCAAAAAC TTGCCGCAGG GGTTTCGAGT
AAGCTTAATG ATATGTTCGC TTTTAGAGCA TCTGTTTCCG CAGACAGTTA CGACGGTGAT
TGGAACAACA CCAAAGAGGA TGGCCCTGAT GTAGGCGGCG AGAAAACCAA ATCTGGCATG
TTAGGTTTGT ACTTTACCCC GAGTAAAAAT ACCGATATCT CCCTTAACTA TATTTACAAC
GAAAACGACG ATGAAACCCA GCCGTTTGGC TTTCAAGGGG CTGAAGAGAA CAACTGCTTC
TTAGACACGC GCCCTTACTA CTGCGGCGAA GCGTTAACAG ACCAACCTAT CAGCATTGGT
GGCGGTGGGT TTTTAGATAA TGACGACTAT GGCCTGCGTA ATACCAGCGA GCACATCAGC
TTCAAATTAA ACCATCACTT TGACTTTGGA ACCGTCTCTT TGATCAGCGG TTGGAATTCT
TATGATGGTG AAACAGGCTT GGATCAGACC TACAACGGCG ATGAACAATC CTTTAGTTTT
GGCTTTTTCA GTGGTGGGCC TTATTTCACG TCGGCAGACT CCTGGTATAC CCTTGATTCC
TCCGGCTCAG ATGAATACAG TCATGAAATT CGTTTCAGTT CCAGCGCATT TGACGACAGG
CTATATTGGT CAGTCGGTGC ATACATATGG CACTCAGAAG CAGAGCCCTC AGCGGTAGAC
AACTTCGCTG AAGAGCTAGA CAACACTGCG TTTATGGCGA TGGGAACGTA TGAGTTTACC
GATGATTTCC GTTTATCAGC TGAAATACGT CGCTCAAGCG ACGAAGTTAC GACCGAAGCG
TATGACACCC TCATTCAAAA TGAACAATTC GCCGATGTCA GCAATGAGTT TGACAGCACA
ACCACGCGCT TTATCGCCGA GTACGATGTC AATGACGACA CTTTAGTATA TTTAACGCGC
TCTGAAGGTA ATAGCCCTGG AGGCTTTAAC ACCAGCACTT TGTTACCTGA TGACTTAGTG
GTTATTGATG AAGAAGACAT GGTGATGTAT GAGCTAGGTG TTAAGTCCAC CATGTTTGAT
GGCAGCTTAT ACGTTTCTGC TGCGGCGTAC ACCATGGATT GGACTAAGCA GCAACTGACG
GATAGCTATG ATGAGGTTGA GGGGCCACCC GTTTCTTACA CCTCTAATGC AGGCTCTACT
GAAATCAAAG GGATTGAAAT TCAAGGTAAA TGGGTTATCA ACGAGCACTT CAACTTGGAC
TTTGGCCTGT CACGTACGGA TGCACAGTTT GAAGAGCTGT TTGACTCTAA TCAATGTCGC
TTCTTCGCCC CAGGCGGTGC TTCTAGTTTC TGTGTAGGTG ACAACCTGCG CGAGTTCGGT
GACTTAAAAG GCAATACACC GCCGCAAGTA CCGAAAAACG AAGCCACGTT AGCACTAAAT
TATTCGACCC AAATTAATGA TGGTATGGAG TTGTTCAGCC GTTTGGACTT CGCATACGAT
TCAACGCGTT ATGCCCATGT GCATAATCTG ATTGAAACTG GCTCGCGTAA GCTTTTACAC
CTCAAAACAG GTGTTCAGCT AGAGAATATA CGTTTAACGG CCTGGGTGAA CAACGTAACG
GATGATGACA CGCCTACTTA TGTATTTAGA TATGTTGATG TGCAGAGCTT TGCTTATGGC
GCTCGCGCGT TTCCTGTTGC ACCAAGTCGA GGTCGTGAAT TTGGTATCAC GGCTTCATAT
AAGTTCTAG
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| Protein sequence | MNMHYSRSKL AQMITLALVA PFVAAPLGAF AQEVAPDTET EFNKEAIELI EVTSRYRKET
LNKIPISVTT FNADDIEKGG LQNINDIAVS AVGMSMEKTF GRQSDIPVIR GVSWIPGFGS
QKASYFIDGV YFGGSIQSLP LDLIERVEIV KGPQSAQYGR RTFSGAINFI TRKPADELSG
YVNLTLGQNG NQKLAAGVSS KLNDMFAFRA SVSADSYDGD WNNTKEDGPD VGGEKTKSGM
LGLYFTPSKN TDISLNYIYN ENDDETQPFG FQGAEENNCF LDTRPYYCGE ALTDQPISIG
GGGFLDNDDY GLRNTSEHIS FKLNHHFDFG TVSLISGWNS YDGETGLDQT YNGDEQSFSF
GFFSGGPYFT SADSWYTLDS SGSDEYSHEI RFSSSAFDDR LYWSVGAYIW HSEAEPSAVD
NFAEELDNTA FMAMGTYEFT DDFRLSAEIR RSSDEVTTEA YDTLIQNEQF ADVSNEFDST
TTRFIAEYDV NDDTLVYLTR SEGNSPGGFN TSTLLPDDLV VIDEEDMVMY ELGVKSTMFD
GSLYVSAAAY TMDWTKQQLT DSYDEVEGPP VSYTSNAGST EIKGIEIQGK WVINEHFNLD
FGLSRTDAQF EELFDSNQCR FFAPGGASSF CVGDNLREFG DLKGNTPPQV PKNEATLALN
YSTQINDGME LFSRLDFAYD STRYAHVHNL IETGSRKLLH LKTGVQLENI RLTAWVNNVT
DDDTPTYVFR YVDVQSFAYG ARAFPVAPSR GREFGITASY KF
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