| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2707 |
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| Symbol | |
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| ID | 4174467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3299350 |
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| End bp | 3300297 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055725 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_662273 |
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| Protein GI | 109899018 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGCC GACTCTCCCT ACCGGTGGTG GGTGCGCCAC TATTTATAAT TTCAGGGCCA
GAACTCGTGA TCAGCCAATG TAAGGCGGGT GTTGTAGGTT CATTCCCTGC TCTAAACGCG
CGCCCTGCAG AAATGTTAGA TACTTGGCTG ACCAGAATCA ACTCTGAGCT AGATGCTTAT
AATCAAGCGA ATCCCGACTG CCCAGCCGCC CCTTACGCAG TCAATCAGAT AGTGCACAGC
TCAAACGATC GATTAATGCA CGACGTAGAA ATATGCGTAA AGCACAAAGT GCCCATCGTC
ATCACCTCAC TAGGGGCCAG ACCAGAGGTA TTTGACGCTA TTCATTCTTA TGGTGGTATA
TGTTTGCACG ATGTGATTGA CAATCGCTTT GCCAAAAAGG CAATTGAAAA AGGTGCCGAC
GGGCTTATCT GCGTGGCAGC CGGTGCAGGC GGTCATGCAG GGACACTTTC CCCGATGGCG
TTTATTCAAG AAGTAAGAGA ATGGTTCGAT GGACCCGTTT TGCTGTCAGG CGCTATTTCG
ACGGGCCAAA ACGTATTAGC CGCGCAAGCC ATGGGCGCTG ATCTGGCCTA TATCGGCTCA
GCTTTTATCG CGACTAAAGA AGCCAATGCA GACCAAGCTT ATAAGCAAGC TTTGGTTGAC
TACGCAGCAG GCGATATCGT GTATACGAAT TTATTTACCG GTGTTCATGG TAATTACTTA
AAGCCATCTA TTGTGGCTGC AGGTATGGAT CCGGATAATT TACCTCAAAG CGATCCTTTG
AAGATGGACT TTGGCTCAGG CAGTAGTTCA AAAGCGAAAG CATGGAAAGA TATTTGGGGC
TGTGGCCAGG GCATTAACGC GATCAAACAA GTTCAATCTA CTCAAGATTT TGTCAGTAAA
CTAACGTCTG AATACGAAGC AGCGAAAAAA AGGCTGCTAG CCCTATAG
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| Protein sequence | MQGRLSLPVV GAPLFIISGP ELVISQCKAG VVGSFPALNA RPAEMLDTWL TRINSELDAY
NQANPDCPAA PYAVNQIVHS SNDRLMHDVE ICVKHKVPIV ITSLGARPEV FDAIHSYGGI
CLHDVIDNRF AKKAIEKGAD GLICVAAGAG GHAGTLSPMA FIQEVREWFD GPVLLSGAIS
TGQNVLAAQA MGADLAYIGS AFIATKEANA DQAYKQALVD YAAGDIVYTN LFTGVHGNYL
KPSIVAAGMD PDNLPQSDPL KMDFGSGSSS KAKAWKDIWG CGQGINAIKQ VQSTQDFVSK
LTSEYEAAKK RLLAL
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