Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2691 |
Symbol | |
ID | 4174451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3278058 |
End bp | 3279065 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638055709 |
Product | LacI family transcription regulator |
Protein accession | YP_662257 |
Protein GI | 109899002 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATA TTAGGCAAGT GGCTAATTTA GCAGGTGTGT CGGTGGCAAC AGTCTCTAGG GCATTGCAGC AGCCGGAGCG CGTGTCACCA AAAACGCGTA ATAAAGTTAT GCTTGCCGTA AACGAAGTGG GTTACAAACC GAATCTGATG GCGGTCAAGT TCCGCTCAGG TAAAACACAT AGTTTGGTAG CACTGGTACC TACGGTAGCA AACGTCTTTT TTGCTCGCGT GATAAGTGGA ATGCAGATAG CGGCCGCCCA GCGTGGTTAT ACCATTTTAC TTGCTAACAC ACTGGGCGAT GAAACCATAG AGGCAAACTA CGCAAAAATG GTGCAAACCT CTCAGGCTGA TGGGCTCATT CAATTAAGAG CGCATAATCC CTTTGATGCA TCGATCAACA AGCCCAACGA ATTACTGCCC ATGGTCAACG CGTGCGAGGT CATGCACGAC ATTAACTGCC CTGTTGTTAC GTTAGATAAC CGCGCAGCGG CTAAAGCCAT GACGATGCAT TTAATTGAGC AAGGTCATAA ACGTATCGCA CTCATCAAAG GCCCTCAATC AAGCCCACTG ACGCGCGAGC GCTTGGCAGG TTATGGCGAT GCGCTAACCG AGGCAGGTTT GAAATTTGAT GATTCCCTGC TCTATCCAGG TGACTTTACC TTGCAATCCG GACATGACGC AGCCACTAAA ATCATTGCCA GTGAGCACCG CCCAAGTGCG GTATTTTGTG AAAATGACGA AACCGCCATT GGGGCAATGC AGTGTTTTAA ACAAGCGGGA CTGCGAATTC CCCAAGATAT TTCCATTGCG GGGTTTGATG ATATTTCATT TTCTGCATTT TGCGATCCCC CGCTGACCAC TATCGCTCAG CCAGCAGAAG AGTTTGGCCA AAGTGCGGTG TCATTATTGA TTGATTTACT CGAAGGCAAG ATCACCAAAG CGCCAAAAGT CATCATGCCA TTTGAATTAA TTGTGCGCGC TAGTACGGGC CCAGCGCCGA CGCTTTAG
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Protein sequence | MSNIRQVANL AGVSVATVSR ALQQPERVSP KTRNKVMLAV NEVGYKPNLM AVKFRSGKTH SLVALVPTVA NVFFARVISG MQIAAAQRGY TILLANTLGD ETIEANYAKM VQTSQADGLI QLRAHNPFDA SINKPNELLP MVNACEVMHD INCPVVTLDN RAAAKAMTMH LIEQGHKRIA LIKGPQSSPL TRERLAGYGD ALTEAGLKFD DSLLYPGDFT LQSGHDAATK IIASEHRPSA VFCENDETAI GAMQCFKQAG LRIPQDISIA GFDDISFSAF CDPPLTTIAQ PAEEFGQSAV SLLIDLLEGK ITKAPKVIMP FELIVRASTG PAPTL
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