| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2687 |
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| Symbol | |
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| ID | 4174447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3273127 |
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| End bp | 3274032 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055705 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_662253 |
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| Protein GI | 109898998 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACT CACGTCGCAA TATGCTTAAA GGTATGGCAC TTAGTAGTGC CGCGTTGGCA
GCAAGTACAA TGGTCAGTGG CTGTGCATCA AGCCAGGCGT CACAAAGTGG AAGTCAACAA
ACTACTTCGA AATTTAAAGG CAATATTAAT CACTCGGTTG CGCGCTGGAC ATACGGAGAA
TTATCTATTG AAGAGCTTTG CCAAGTGGTT AAATCGTTGG GCTTTTCAGC CATCGATCTC
ATTGGCCCAG AAGGCTGGCC AATACTCAAG CGCTACGGTA TCGACTCATC AATGTGTAAT
GGAGCTGAGC TGAACTTAGT CGATGGCTTT ATTCACCCTG AATTTCATGA TGAGCTTGAA
AAGCGTTATC TAAAACATAT CGATTTAGTG GCACAGGCGG GGTACAAAAA CCTCATTTGT
TTCAGCGGCA ATGCCAGAGG TATGAGTAAA GAGCAGGGCC TTAAAAATGC AGTGGCAGGT
CTTAAACGTA TTTTGCCTTA TGCTGAGCAA AAAGGTGTGG TAATACAAAT GGAGTTGTTT
AACAGCAAGG TTGATCACCC AGATTATATG GCTGACAGCT CGAAATGGGG CGTGGATCTA
TGTAAAGCCC TTGGCTCAGA AAATTTTAAG CTGCTTTACG ACATCTACCA TATGCAAGTG
AATGAAGGCG ATATCATTCG CACCATTCAA GATAATCATC AATATTTTGG CCACTACCAC
ACTGCAGGTG TGCCGGGTCG TCATGAAATT GGAGATAACC AAGAGCTTTA CTATCCAGCG
ATTGCTCGTG CAATTAAAGA TGTGGGCTTT ACCGGTTATC TTGCTCAGGA GTTTATACCT
GCTGCTGAGA CTAAAGCAGG CAAAATCGAA TCGTTACGCG AAGCAATTCA TATCTGTGAT
GTGTAA
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| Protein sequence | MSNSRRNMLK GMALSSAALA ASTMVSGCAS SQASQSGSQQ TTSKFKGNIN HSVARWTYGE
LSIEELCQVV KSLGFSAIDL IGPEGWPILK RYGIDSSMCN GAELNLVDGF IHPEFHDELE
KRYLKHIDLV AQAGYKNLIC FSGNARGMSK EQGLKNAVAG LKRILPYAEQ KGVVIQMELF
NSKVDHPDYM ADSSKWGVDL CKALGSENFK LLYDIYHMQV NEGDIIRTIQ DNHQYFGHYH
TAGVPGRHEI GDNQELYYPA IARAIKDVGF TGYLAQEFIP AAETKAGKIE SLREAIHICD
V
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