| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2681 |
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| Symbol | |
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| ID | 4174441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3265604 |
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| End bp | 3266611 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055699 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_662247 |
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| Protein GI | 109898992 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCA TTAAAGATGT AGCAAAATTG GCCGGTGTGT CACCAGCGAC GGTATCTAGG
GTCTTGAGTT CGACCGTTGT CGTCAGCCCA AAAACCAAAG CCAGAATTGA AAAAGCCATC
GCTGAGCTGG ATTTTAGGCC CAATGCCCAC GCTCGTGCAT TAGTGAATAA AAGTACACAT
ACCATAGGTG TGGTTATTTC GCAGCTCGCC GACCCTTTCT TTGCGCAAAT GGCTAGCAGC
ATCGAAGACG TCGCTAAAAA ACGCAAGTTC AAGGTATTGG TCAGTACCGG CTCGTTAGAT
GCGCAAAAAG AATTAACCGC CATCAAAAGT TTACAAGCCC AGCGCTGTGA GGCCATGGTA
GTGAACAGTA AAGCCTTGGC TGATGACGTG CTAATCGATT TGGCTCAGCG CATTCCGGGC
TTCGTATTAA TCAATAAATT TATTCCCGAG ATCAGTGAGC GTTGTGTGTG GTTTGATAAT
ATTGCGGGAG GAAAGGTGAT GGCCGATTAC ATGGCGTCCC TTGGTCATAC TGGAATTGCG
GTGGTTTCCA CCAAAGAGCG AGTCTATGAT GCAACTCACA GGTTAAATGG TATTCGCCAG
TCACTGAATG CTCATCAGAT AGCTTTACCA GAGGAGTATA TTGCGCACGG CTCTCCAGAT
TATGACGGAG GCCGTGCCGC AGTCGCAAGT TTCATTCAGC GCGGGGTGAA TTTCAGTGCT
GTGCTTTGCT ACAACGATGC AATGGCAACT GGCGTTATCT CGGCATTGAC GGATTTAGGA
AAACGAATAC CGGATGATGT ATCAATCATC GGCTTTGATG ATGTTTTGTT GGCAAAGTAT
TGTATGCCTA AATTGACTAC GGTGAAGTAC CCTATTGATA TTATGGCACG TAAGGCCACA
GAACTGGCCC TAAGCCTTAT TGCTAAAGAA CAAACGCTTA ACCAAAACGC CAAAGACTAC
CAATATAAGC CATTTCTGGT GAAGCGTGAG TCAGCCACAA AACGCTAG
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| Protein sequence | MATIKDVAKL AGVSPATVSR VLSSTVVVSP KTKARIEKAI AELDFRPNAH ARALVNKSTH
TIGVVISQLA DPFFAQMASS IEDVAKKRKF KVLVSTGSLD AQKELTAIKS LQAQRCEAMV
VNSKALADDV LIDLAQRIPG FVLINKFIPE ISERCVWFDN IAGGKVMADY MASLGHTGIA
VVSTKERVYD ATHRLNGIRQ SLNAHQIALP EEYIAHGSPD YDGGRAAVAS FIQRGVNFSA
VLCYNDAMAT GVISALTDLG KRIPDDVSII GFDDVLLAKY CMPKLTTVKY PIDIMARKAT
ELALSLIAKE QTLNQNAKDY QYKPFLVKRE SATKR
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