| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2679 |
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| Symbol | |
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| ID | 4174439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3263133 |
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| End bp | 3264146 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055697 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_662245 |
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| Protein GI | 109898990 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACCA TTAAAGATAT TGCTAAGGCT GCAGGTGTAT CACCGGCGAG TGTTTCAAGG
GTTATTAACG ATGGGCCGAA AGTCGGTGCT AAAACACGTG AAAAAATAAA GCGCATTATG
CGCGAAATGC AGTACCAACC AAATGCTAAT GCGCAAGCAA TTAACATGCA AAACAACGCG
TCTATAGGAA TTGTACTTGC TGACTTAACG GATCCTTTAT TCGCCAAAAT GGCTCATGGT
ATTGAAAAAG TCGCCGCACA AAAAGATTTA CAGATTTTTC TCAACTCAGG GGCGTTTGAC
CGCACCAGCG AGCTCGACGC CATTGAAGTA TTACTGGAGC ATCGCTATAA AGCCTTAGTG
GTGCACAGTG CGATGATAGA CGAAAAGACC CTAATCGAAT TTGCCCGTAA AGTGCCAGGG
TTAGTGTTAC TCAATCGGCA TATCAAAGAG ATTGAAAATC GCTGCATCTG GCTAGATGAC
AAGTTAGGCG GCGCGTTGAT GGCAGACCAT ATCGTGGATA AAGGCCATAA AAAAATAGCG
ATTATTGGCG TGGATGGTAT TCAAAATAAC ACCCGACTTC GCATTGAGGG CATGAAAGCC
CAGTTAGCCA AATATCCAGT CACCTACGAA ATCGAAATGT TAGCGCAAGG CGCGGCTACC
TACGAAGGCG GTGAAGTCGC AGTGCAAAAC TTACTCGCAC GAGGGGTAGA GTTTAGCGCT
ATTTTAGCCT ACAACGATGC CATTGCGGTG GGGGCGGTTT CAATGTTGAA GGCTCATGGC
ATGACAGTGC CTGATGATGT ATCAGTGGTT GGTTTTAACA ATTTGATCTT GGCACAGTGC
ATAAAGCCTA AGCTGACGAC AATCCACAAT CCTATCGAAG AAATGGCCAT GAAGGCGACG
GAGCTGGCAC TTTCACTAAG CAAGGGAAAT GGTGATAGCG AGCATGATTA CGCCATAGAT
GAGCACAAAT ACCGTCCAGT GCTGGTAGAA AGACATTCCG TAAAGCAGCT CTAA
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| Protein sequence | MPTIKDIAKA AGVSPASVSR VINDGPKVGA KTREKIKRIM REMQYQPNAN AQAINMQNNA
SIGIVLADLT DPLFAKMAHG IEKVAAQKDL QIFLNSGAFD RTSELDAIEV LLEHRYKALV
VHSAMIDEKT LIEFARKVPG LVLLNRHIKE IENRCIWLDD KLGGALMADH IVDKGHKKIA
IIGVDGIQNN TRLRIEGMKA QLAKYPVTYE IEMLAQGAAT YEGGEVAVQN LLARGVEFSA
ILAYNDAIAV GAVSMLKAHG MTVPDDVSVV GFNNLILAQC IKPKLTTIHN PIEEMAMKAT
ELALSLSKGN GDSEHDYAID EHKYRPVLVE RHSVKQL
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