| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2664 |
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| Symbol | |
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| ID | 4174424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3246230 |
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| End bp | 3248218 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055683 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_662231 |
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| Protein GI | 109898976 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.373594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTGCAC TTTTGCAATT AGGCGTTGAT TACTTTCAGT TAGAAATGGG CATTATTAGC
CACATTGAAG ACGAGCTTTA CACTGTCTCC TACGCGATTT CACCTGCAAA TGATTTACTT
AGTGGCACCA CATTCGACTT AGGTGATACT TACTGCGTAC ACACTTTAGC CACAAATCAA
GCTCTGTCTT TTTATCACGC AGGTCAAAGT CATATTGCTC AGCATCCTTG CTACCTTAAT
TTGGGGCTAG AAAGTTATAT CGGTGCGCCA ATTGTGGTTG AAGGTAAACG TTTCGGCACG
ATAAATTTTT CAGCGAGTGC CCCACGCAAT CAGCCTTTTA GCACTGAAGA ACTGAGTTTT
ATCGAACTGC TTTCGCATTG GGTTGGCAAC GAAATAGCCC GCCATGAGAA ATTAGCGTTG
TTAAAAGAAC AGCAAAAATT AATGGCGCGC CAGCAAGATA TATTGGAACA AATGGGTCAA
GTTGCAGGTG TAGGGGCGTG GGAGCTAGAT CTTGTTGACG GGAAGCTTTA TTGGTCCTCG
GTGATGAAAG ACATTCATGA GGTCGATCAA GATTTTGTAC CGGATTTGGT CAACGGATTA
AATTTCTATA AAGAGGGAGA GAATCAAACC CGTATTACTC AATGCGTCAG ACGCTTGATG
GATCACGGCG GCAATTTCTC TGGTGAGTTT GAAATTGTCA CTCAAAAAGG GACGCCCAAA
TGGGCGGCGG TTAAGGGCAA AGCCGAATTA GACGGGGGAA AATGTGTCCG GCTGGTGGGT
GCGTTTCAAG ATATCACTGA GCAAGTCAAT TCACGTGAAC AGCTGGAGCA CAGGCACAAG
GAACTGTCAT TGGCGCTTGA AGCTCGCAGT TTATTTTTAG CCAATATGAG TCATGAAATT
CGTACGCCCA TTAACGGGGT ATTGGGCATG TTGCAAATAT TAGACGCCTC TTCTTTGGAT
AATGAACAAC GACGGTTTTT GGGCTTAGCC AAAGACAGCG CCACGTCATT GCTAGGGATC
ATCAATGACA TCTTAGATTT TACCAAAATT GACTCTGGTA AGTTGGCACT GGAAACCGTC
CCTATCGACC TGAATCAGGT TCTCAATAAT TGTGTTGATA TCTTTAATCC ACACGCAAAA
GAAAAATCCA TACAATTGGT TAAGCAACTC GAAAACACCC AGGGCGCCAG TATCATTACC
GACCCTACGA GGCTGCGGCA AATTTGTGCT AATTTGCTTT CAAATGCGCT TAAGTTTACC
CATCAAGGGC AAGTGAACAT TGCGACAGAG TTGACGCTAC TGAAAAAAGG CAAGGCTACA
TTGACCATTT TTGTGAAAGA CTCTGGGGTA GGCATGACGC AAGAGCAACA AGCGCTATTA
TTTTCACCTT TTAGCCAAGC CGATGTGTCT ACCACGCGCA AATTCGGTGG CACAGGATTG
GGGTTATCAA TTACGCGCAA GCTTTGTCAA TTGATGTCAG GGGATGTCAG CGTAAAAAGC
GTACTGAACA AAGGAAGTGT GTTCTCGGCG CAAATTGAAG TGGGTATTAT GGCCAAAAGT
GTGCATCCTG CTGAGCCTGA ACTGGCTGTA TCCCAAAGTA GGGATCTAAG CGGTCTACAT
GTATTGGTAG TTGAAGACAA TGAAATCAAT CAAGTGGTGA TTGGTGAAAT GCTTAAACAA
CGACAAATAA CCTATGACAT CGTTAATGAT GGGCTTGAAG CGCTAGCCAT ACTCGAAGAC
GAACTAAGTA GTGAGAACCC ATACACGTTA ATTTTGATGG ATTGCCAGAT GCCTAATATG
GATGGATATC AAACTACTCA GCATATTAGG CAATTTTCGT CTCATGTAGC GACTATTCCT
ATTATCGCGC TGACCGCGAA TGCATTATCA GAAGAGCGTG ATAAGTGCTT TGCCAGTGGC
ATGAGCGAAT ACCTATCTAA GCCTGTTGAC CAAGAAAACC TCTACGCCGT GCTTGAGAAA
TACAGTTAA
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| Protein sequence | MVALLQLGVD YFQLEMGIIS HIEDELYTVS YAISPANDLL SGTTFDLGDT YCVHTLATNQ
ALSFYHAGQS HIAQHPCYLN LGLESYIGAP IVVEGKRFGT INFSASAPRN QPFSTEELSF
IELLSHWVGN EIARHEKLAL LKEQQKLMAR QQDILEQMGQ VAGVGAWELD LVDGKLYWSS
VMKDIHEVDQ DFVPDLVNGL NFYKEGENQT RITQCVRRLM DHGGNFSGEF EIVTQKGTPK
WAAVKGKAEL DGGKCVRLVG AFQDITEQVN SREQLEHRHK ELSLALEARS LFLANMSHEI
RTPINGVLGM LQILDASSLD NEQRRFLGLA KDSATSLLGI INDILDFTKI DSGKLALETV
PIDLNQVLNN CVDIFNPHAK EKSIQLVKQL ENTQGASIIT DPTRLRQICA NLLSNALKFT
HQGQVNIATE LTLLKKGKAT LTIFVKDSGV GMTQEQQALL FSPFSQADVS TTRKFGGTGL
GLSITRKLCQ LMSGDVSVKS VLNKGSVFSA QIEVGIMAKS VHPAEPELAV SQSRDLSGLH
VLVVEDNEIN QVVIGEMLKQ RQITYDIVND GLEALAILED ELSSENPYTL ILMDCQMPNM
DGYQTTQHIR QFSSHVATIP IIALTANALS EERDKCFASG MSEYLSKPVD QENLYAVLEK
YS
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