Gene Patl_2654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2654 
Symbol 
ID4174414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3219218 
End bp3220060 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content37% 
IMG OID638055673 
Producthypothetical protein 
Protein accessionYP_662221 
Protein GI109898966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0162523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGTCG AAGTCGAAAA TTCAGGTAAA GCAGAAAGCA ATGTTGAAGG TACTATTAAC 
GCAACTACTG GCCTTGTTAA GGCTATTCCA ATATATCAAG ACGCTTTGCA ACCAGCAGCA
CAAGAAATAG GGAAAGCCTT AGGAACAGTC GCTAAAACGG TGAATGTTGC TTTAGCGCCA
GTATCGGCAT TAATTTGGGG TTATGATCAT ATAAAAGACT TTGTTGATAA CAAAGTAGCA
GAAAAGCTTC AAAATACACC TGAAGAAAAT ATTATAACTC CACCACCTCA TGTGGCAGGA
CCGACTTTAG AGTCGCTAAA ATACACAGGT AGTATCGAGG AGTTAAGAGA ATTATATGCA
AACCTGTTAG CGTCATCGAT GGATGCAGCA ACTACTAAAG AAGCACATCC GTGCTTTGTT
GAAATTATAA AACAGCTTTC TGCTGACGAA GCAAAATTAT TAACAGCATT CTTAACTGTT
GAACAAGAGC CGATTATCAC AGTAAAAAAC ATGCTAGCAG ATAATTCTGG TGGAAGAGAT
CAATTTAGAC ACTTTTCAGT GTTAGGTGAA AGAACAGGTA TAGAAGATCA TAACGTTATC
CCAAACTATC TAGATAATCT ATGTAGATTA GGGATAATAG AAATCCCAGA TACTTATACC
CTTATAGGTG AAAATATTTA TAAACACCTT GAAGAACATC CTTTTGTTAT GGCGCATAAG
AGTTATATTG ATCAATTAGA AGGCCGGACG TTTGGTGTAG ATAAAAAAAC AATCAAATTG
ACCGGGTTAG GTCGGCAGTT TATACATGCC TGTGTAAAAG ATCACCGAAA CAATAGCAAA
TAA
 
Protein sequence
MTVEVENSGK AESNVEGTIN ATTGLVKAIP IYQDALQPAA QEIGKALGTV AKTVNVALAP 
VSALIWGYDH IKDFVDNKVA EKLQNTPEEN IITPPPHVAG PTLESLKYTG SIEELRELYA
NLLASSMDAA TTKEAHPCFV EIIKQLSADE AKLLTAFLTV EQEPIITVKN MLADNSGGRD
QFRHFSVLGE RTGIEDHNVI PNYLDNLCRL GIIEIPDTYT LIGENIYKHL EEHPFVMAHK
SYIDQLEGRT FGVDKKTIKL TGLGRQFIHA CVKDHRNNSK