| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2647 |
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| Symbol | |
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| ID | 4174407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3212984 |
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| End bp | 3213679 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055666 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_662214 |
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| Protein GI | 109898959 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.895609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAC AAGCACCTGA ATTAAACCTT GGTATGCGCA TTTTATTGCA AGGTGAACAG
AGTATTTACA ATCGAATATT GGCTGACATA GCCATGGGAA AACTCGTCAG TGGCGACCGA
TTAGTCACCA CGCAGCTAGC AAGTTGTTAC AACACCAGCA TAAACCCTGT GCGCGAGGCA
CTTAAGCAGC TTGAAGGAGA GGGGTTTGTC ACGTCTCAGA AAAACAGTGG CGCCAGAGTG
GCAGCATTTG AATACGCCAC CATGCGTGAA GTGTTTGAAA TATTGCAATT GCTAGAACCG
TATTTTTTGT CTTGGTATGC CAACCATTGT TCACAAGAAA GCCTAACTCG ATTAGCAGAG
ATACAAGCCC AGCTTAAAAC GCTTGCTGTT ACAGACTCAG CGGGCCTGCG TGATCTTGAT
ACTGCATTTC ATTGGGAGAT GTACCGTCAT CACTATAACG CCAGTGCACT GCGTTTATGG
AAAAACAAAA AGCTTATTTT ACAAGCCTTG CATGGTGATT TACCTGTCTG CCAAGAGCGC
TTTAACGCCA CGTTAAAAGA GCACGATCAT ATTTTATATT TACTCAACGC ACGAGACGAT
GAATCAGCCG TGCGTGCCTT AACCAAGCAT GTGATCAGTG GCGGCGAGTA TTGGTCAAGC
GTGATCACCG AGCAGCTAAG CGAGTTATCA GCATGA
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| Protein sequence | MNEQAPELNL GMRILLQGEQ SIYNRILADI AMGKLVSGDR LVTTQLASCY NTSINPVREA
LKQLEGEGFV TSQKNSGARV AAFEYATMRE VFEILQLLEP YFLSWYANHC SQESLTRLAE
IQAQLKTLAV TDSAGLRDLD TAFHWEMYRH HYNASALRLW KNKKLILQAL HGDLPVCQER
FNATLKEHDH ILYLLNARDD ESAVRALTKH VISGGEYWSS VITEQLSELS A
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