| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2646 |
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| Symbol | |
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| ID | 4174406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3211833 |
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| End bp | 3212987 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055665 |
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| Product | mandelate racemase/muconate lactonizing-like protein |
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| Protein accession | YP_662213 |
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| Protein GI | 109898958 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTA CCAATATTAA AACTTACGGT TTTTGGCTGG GCTTTCGCAA TGTTTGTTTA
GTGAAAGTTG AAACCGATCA AGGTATTTAT GGCTGGGGAG AATCCGGTTT ATCAGGGCGC
GAACAAGCCG TCATCGGGGC GATAGAGCAC TTTAAACATT TCTTGATTGG CCAATCTGCT
CTGAATATAA ATGCCCTGTG GCAAGAGATG TACCGTAGCC AGTATTTTGA AGGGGGCAGA
GTGTTAGCGG CGGCAATATC TGCTATCGAT ATTGCTTTAC ATGACGTTTG CGGAAAGTAC
CTTAATGTAC CTGTTTATCA ATTGCTAGGG GGCAAGCAAC GTCAGCGAAT ACCGTTATTT
GTCACCTCTA CGTTGGACTT TGGCGATGAA TTTATTGAGC ACGTTAGCCA GCTTAAGGCT
CAAGGCTGGC AGGCTATTCG TGCTACTACA GGGGAGCATG GCTCAGCGGG TAAAACCGAG
GTTTTCGATG CACGTAAATC TATCGCCAAA GCGGCAACTT GGTTGAGTAA AGCCCGTGAG
GTGTTGGGCA ATGAAACCGT ATTAGGTATT GATTATCACC ACAGGTTAAC CGTGGCTGAA
ACCGCGTCAT TTTGTCAACG TATGCCCACG GGTACGTTGG ATTTCATCGA AGAGCCTATT
CGAGACCAAT CTTTAATCAG CTATCAAAAT TTACGGACCT TAGTAGATGT TCCCTTCGCC
ATCGGCGAAG AGTTCTCGAG CAAATGGGAC TTTGCACCTT ATGTAGACTC CGCCTTAACC
AACTTTGCGC GTATCGATAT TTGCAATGCG GGGGGCTTTA GTGAAGCCAT GAAAATCGCC
GCTATGTGCG AAACCCGCTA CATAGATATG ATGCCGCACA ACCCCCTTAG TCCTATATGC
ACTGCCGCAT CCGTGCATTA TTGCGCTGCA CTGGCCAATC TAAATTGGCT CGAAATTGCC
CCTTACGACG GGGAGCTAGA CATGTACGAC GAGATTTTTA GCCATCGCCC TAAAGTATCA
AGTAATACGT TTGAGGTCTG CGATCGCCCA GGTTTGGGCA TTGATGTGAA CGAGTCGGCT
ATTCCTAAAG ATGCATTCAA ATTCTGGGAG CCACCGCGTT TAATCAAGCC TGACGGCTCA
TACACCAACT GGTAA
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| Protein sequence | MKITNIKTYG FWLGFRNVCL VKVETDQGIY GWGESGLSGR EQAVIGAIEH FKHFLIGQSA
LNINALWQEM YRSQYFEGGR VLAAAISAID IALHDVCGKY LNVPVYQLLG GKQRQRIPLF
VTSTLDFGDE FIEHVSQLKA QGWQAIRATT GEHGSAGKTE VFDARKSIAK AATWLSKARE
VLGNETVLGI DYHHRLTVAE TASFCQRMPT GTLDFIEEPI RDQSLISYQN LRTLVDVPFA
IGEEFSSKWD FAPYVDSALT NFARIDICNA GGFSEAMKIA AMCETRYIDM MPHNPLSPIC
TAASVHYCAA LANLNWLEIA PYDGELDMYD EIFSHRPKVS SNTFEVCDRP GLGIDVNESA
IPKDAFKFWE PPRLIKPDGS YTNW
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