| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2642 |
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| Symbol | |
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| ID | 4174402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3206286 |
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| End bp | 3208634 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055661 |
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| Product | agarase |
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| Protein accession | YP_662209 |
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| Protein GI | 109898954 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAT CGCCAAAAAG CGCAGGCTTT ATCCTTAGTG CTATCGCTCT GGCAGTCACC
GCACTTGCAG GCTGCAATAA CAACCAAGCT ACAAATAACA GTGTTGCAAC GCCAAGCGAT
GCCCCAACCA GACAAACACA GCAAAATGTG TTGCCTTGGG ATTTTGCAGG GGTGACAGAC
ATGCAAGACG TAACACTCAC CGCGGCGGAT ATGCACGTGG TTGATGTTGA TGGTGAACAA
AAACTGGCTA TCGATTTACA CGCCAAAGAG CATAAAAGCG CAGGCTTTAG TTTTATTCCT
GATTCGCCTT GGGATTGGAG CCACGAAGGT CAATTCGCCT TTGCAATCGA AATCGAGAAT
CCTAGCCAAT CTTCAACCCA TCTGTATGTG TCAGTCAAAG ACGCCACAGG GCAATCCCAT
AATCGTAGCT TTGCTGTACC TGGCCACTCC CAAGATACTT ATTTTATGGC GCTAAACGAC
CCAGACCTGT CTATTGAAAC CGGTATTCGC TCTAATCCTA ATAATTGGCA AAGTGAATTT
ACCCCAATGA TTTGGCGTTA TGGCACTAAG AAAATTGATT TGAGCCAAGT AAAAAGTATC
GAATTCGATG TTCGAGGCGT GCCGGAAGAC AAACACTTGA TTGTGGATAA CCCACGTCTT
ATTAAACCGC AGAAAATAGA TCAAAACTAT CTTGTGGGTT TAGTCGACGA GTTCGGTCAG
AACGATAAAC TTGAGTTCAC CAATAAAATT GATACGGTGG AACAGCTACG GGCACTCAAT
GCCAAAGAGC AAAGTGCGTT CACCCATGAC GTACCAAAAG GGCGATCGAA ATTTAATGGC
TGGGCTGATG GGCCAAAGCT CGCGGCAACA GGGTATTTTC GAACCGAAAA ATATCAAGGG
AAATGGACCT TAGTTGACCC ACAAGGGTAC CTGTTTTTCT CAAACGGTAT CGCCAACGTG
CGTATGTCTA ATACCTCTAC CATTACTGGG TATGACTTTG ACAGTCAGTT TATTAAGCAG
CGCGCCCAGG GCGACTTTAC CCCAGAAGAT TCCATTGGTT TAAACAGGGC ACCAAAAGCA
GCGTGGCCAA GTCGTCATGT GACCTCAGAA CTACGTGCGA ATATGTTCAC ATGGTTGCCA
AGCGTTGATG AGCCATTAGC CGAACATTTT GGCTATCGAC GAGAAGTGCA CACTGGGGTA
GTAGATAAAG GCGAAACGTA CAGCTTTTAT AGCGCTAACC TAGCACGCAA ATACGCCAGT
AACGACCCAA AGGTGTTCAT GCCTAAGTGG CGCGATACCA CAGTGGACAG AATGCTCGAT
TGGGGATTTA CCTCCTTTGG TAACTGGATT GACCCGAGCT TTTATCAGCT TAATCGTATT
CCGTATTTTG CCAATGGTTG GATAATCGGT GATTACAAAA CCGTGAGTAG CGGTAATGAC
TACTGGAGTC CATTGCCGGA CCCATTCGAT CCCGTTTTTA AACAACGGGC AATGGTGACT
GCCAACAAGA TTGCCCAAGA AGTACAAAAC AACCCTTGGT GTGTGGGGGT GTTTATCGAC
AATGAAAAAA GTTGGGGACA AGAGGGCTCG ATTGAACGCC AGTATGGCAT TGCTATTCAC
ACCCTTGAAG TTGATGCCAA AGACAGCCCA ACCAAAGCGC AATTCGTCAC GTATTTAAAG
AACAAATACT CAGACATTGC CGAGCTAAAC GGCAAATGGA ATACGCAAAT TCGTACTTGG
GATGATGTGG CCACTGGCAT AACACTGACC AGGTTTAACG ACCCTATTAT CGAAGACTTA
TCAGCCATGC TCAGCCTGTA CGCCGAGAAA TACTTTGCGG TAGTGCACGA TGCTGTAGAG
CAAGCCATGC CAAATCACAT GTACATGGGA GTGCGTTTTG CAGATTGGGG CATGACGGAT
GAAATTCGCA ACGCCGCGGC AAAATACGCT GACGTGGTTA GCTACAACTA CTATAAAGAA
GCCATAACCG ACCAAGCTTG GGGCTTCTTA GCAAAAATCG ACAAGCCGAG TATTATCGGC
GAGTTCCACA ATGGCGCATT GGACTCAGGG CTACTCAACC CAGGCCTTAT CCACAGCGCT
TCTCAGGCGG ATAGAGGCAA AAAATACCAA GAATATATCA ATAGTGTCAT TGATAACCCG
TATTTTGTCG GGGCGCATTG GTTTCAATAT ATTGACTCGC CCTTAACGGG CAGGGCTTAC
GACGGTGAAA ACTATAACGT TGGATTTGTG AGTGTCACCG ATACGCCATA CCAGCCATTA
GTTGATGCCG CCAAAGCGGT TAACGCAAAT ATTTACACGA GGCGTTTTGG CGATGCACAG
CCTAAGTAA
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| Protein sequence | MNTSPKSAGF ILSAIALAVT ALAGCNNNQA TNNSVATPSD APTRQTQQNV LPWDFAGVTD
MQDVTLTAAD MHVVDVDGEQ KLAIDLHAKE HKSAGFSFIP DSPWDWSHEG QFAFAIEIEN
PSQSSTHLYV SVKDATGQSH NRSFAVPGHS QDTYFMALND PDLSIETGIR SNPNNWQSEF
TPMIWRYGTK KIDLSQVKSI EFDVRGVPED KHLIVDNPRL IKPQKIDQNY LVGLVDEFGQ
NDKLEFTNKI DTVEQLRALN AKEQSAFTHD VPKGRSKFNG WADGPKLAAT GYFRTEKYQG
KWTLVDPQGY LFFSNGIANV RMSNTSTITG YDFDSQFIKQ RAQGDFTPED SIGLNRAPKA
AWPSRHVTSE LRANMFTWLP SVDEPLAEHF GYRREVHTGV VDKGETYSFY SANLARKYAS
NDPKVFMPKW RDTTVDRMLD WGFTSFGNWI DPSFYQLNRI PYFANGWIIG DYKTVSSGND
YWSPLPDPFD PVFKQRAMVT ANKIAQEVQN NPWCVGVFID NEKSWGQEGS IERQYGIAIH
TLEVDAKDSP TKAQFVTYLK NKYSDIAELN GKWNTQIRTW DDVATGITLT RFNDPIIEDL
SAMLSLYAEK YFAVVHDAVE QAMPNHMYMG VRFADWGMTD EIRNAAAKYA DVVSYNYYKE
AITDQAWGFL AKIDKPSIIG EFHNGALDSG LLNPGLIHSA SQADRGKKYQ EYINSVIDNP
YFVGAHWFQY IDSPLTGRAY DGENYNVGFV SVTDTPYQPL VDAAKAVNAN IYTRRFGDAQ
PK
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