| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2623 |
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| Symbol | |
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| ID | 4174383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3186635 |
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| End bp | 3187096 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055644 |
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| Product | alkylhydroperoxidase |
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| Protein accession | YP_662192 |
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| Protein GI | 109898937 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTTAC GCGTTAATTA CTTTGCTCTA GCATCAAAAG CAATGCAAAT ACTGATGAAT
CAGGAAAGCT ATTTGCGTGC CCAATTTAGC GTGTCAGAAA CGGTGACTCC TGTTATCTGG
GAGTTGGTCA AATTGAGAGT CTCGCAGATC AATCAATGTG CTTTCTGTAT TGATATGCAT
AGTAAAGATG CCTTGAGTGA AGGCGAGACT CCGGAGCGAA TCATTGGGTT AAGTGCTTGG
CGTGATATGC CCCTGTATTC AGAGACCGAA ATGGTCGCAC TGGATTGGGC TGAACATTTA
ACCTTAGCTA AACCAGTGGA TGATGAGTGT TATCAGAGCG TGGCAAAGGT ATTGGGTGAA
CAAGCAATTG TTGATTTAAC CATTGCCATT AATGCCATCA ATAGTTGGAA CCGAATTGCC
AAAACGTTTA CGCCAGAGGT AGGCACCTAT AAACCGCAAT AA
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| Protein sequence | MALRVNYFAL ASKAMQILMN QESYLRAQFS VSETVTPVIW ELVKLRVSQI NQCAFCIDMH
SKDALSEGET PERIIGLSAW RDMPLYSETE MVALDWAEHL TLAKPVDDEC YQSVAKVLGE
QAIVDLTIAI NAINSWNRIA KTFTPEVGTY KPQ
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