Gene Patl_2611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2611 
Symbol 
ID4174371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp3173290 
End bp3173835 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content46% 
IMG OID638055632 
Producthypothetical protein 
Protein accessionYP_662180 
Protein GI109898925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTA TCATCGCCCT CGTTGTTTTA GTCGCGGTAG GGGCAACCCT ATGGCTTTCC 
AATCAAGGGC AAATTGAAAA CCCAGTTCCT CAAACTCAGG AATTGCCGGT TATCTCGCGC 
CAGCAAATTT TAACCGCTAC TGATTTAGTT AATGGGGTCA AGAATGCCCT GCAAGAACAG 
GACGAAGAGG CGATTTCCCA GTGGTTAGAC AGAGCCCTAG CGGTAGCAAA AGAAGCGGAT 
ATGTCACAAG AAGACATTAA CTATATTGCC TCTGATATGG CCAAAGACTT CGTTATTTTT 
CAAGCCCAGC GCAGTATGTT TAATGATGCC GTAGAGCAAG CTTATTATGA GTTATCTACC 
ATCGATGCGA TTAAAGCCGC TTACCCTCAG GCCCAGGATT TATTCCCCAG CGCCGATAAA 
TTAATCATTG AAAGAGATAA ACTCATCGAA AAAATCGCCA CAGAATTAGC TGGCGGAGAT 
ACCCCAAGCG ACGCTGAAGT GCGAACCGCT CGTCAGCAAT GGCTAATGCG TTACGCCCAT 
CAATAA
 
Protein sequence
MKVIIALVVL VAVGATLWLS NQGQIENPVP QTQELPVISR QQILTATDLV NGVKNALQEQ 
DEEAISQWLD RALAVAKEAD MSQEDINYIA SDMAKDFVIF QAQRSMFNDA VEQAYYELST 
IDAIKAAYPQ AQDLFPSADK LIIERDKLIE KIATELAGGD TPSDAEVRTA RQQWLMRYAH 
Q