| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2608 |
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| Symbol | |
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| ID | 4174368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3171554 |
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| End bp | 3172345 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055629 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_662177 |
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| Protein GI | 109898922 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAGTG CAATGGATGC CAATAAAGCC CCGCTGCTAA CACACCTTAT CGAACTTAGA
CGTCGCTTAC TGTACTGCTT TGGATTTTTT GCTCTGATGT TTGGTGTATC GTATTTTTTT
GCTGAGCAAA TATACCAATT TCTACAACAA CCTTTACTGC AGATCTTTGG CCCCGACAGC
GGTCGGCGAA TGATTTACAC CGGCTTGCAC GAAGCGTTTT TTACATACCT TAAACTGGCA
TTTTTTAGCG CAACGTTTTG CACCTTGCCC ATCACCCTAA TTCAAGTTTG GAAGTTTATT
GCCCCCGGTA TGTATCAACA GGAGCAAAAA GCCCTTTCAC CGCTTTTTAT TGCCACGCCC
ATTCTATTTA TAGGCGGCGC GGCACTGGCT TTTTATTTGG TCATGCCATT AGCGTGGGAG
TTTTTTATTA GTTTTGAATC ACTAGGCCAA GAGGATGGGA TCAGCGTCGA GCTGGAAGCA
AAAATGAGCG AGTACTTAGC CCTAGTGATC CGATTGATCC TCGCCTTTGG CTTATGTTTC
GAATTGCCTG TGTTGTTGTT GGTGCTCGCC AAAGCGGGGG TGGTGGACGC CGACATGCTT
AAAACGTATC GCAAACATGC CATAGTATTA GTTTTCTTTA TCGCCGCTTT GATTACTCCA
CCAGATTTGA TTTCTCAAAT TGTATTAGGA GTGCCAATTT TACTGTTATA CGAGCTGTCA
ATTGTATTGA TAAAGCGCAG TGAGTCAGAC AAAAAACACT TACAGCAAAA ACAAATGGGC
CCGTCGATTT AA
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| Protein sequence | MSSAMDANKA PLLTHLIELR RRLLYCFGFF ALMFGVSYFF AEQIYQFLQQ PLLQIFGPDS
GRRMIYTGLH EAFFTYLKLA FFSATFCTLP ITLIQVWKFI APGMYQQEQK ALSPLFIATP
ILFIGGAALA FYLVMPLAWE FFISFESLGQ EDGISVELEA KMSEYLALVI RLILAFGLCF
ELPVLLLVLA KAGVVDADML KTYRKHAIVL VFFIAALITP PDLISQIVLG VPILLLYELS
IVLIKRSESD KKHLQQKQMG PSI
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