Gene Patl_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2600 
Symbol 
ID4174360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3161674 
End bp3162447 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content44% 
IMG OID638055621 
Producthypothetical protein 
Protein accessionYP_662169 
Protein GI109898914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.370975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAA AATGGTTGTT ACCCTTGGTT ATTAGCTTAA GTGCTGTGTC TCCTCTAAGT 
CAGGCACAGT ATAAGAATGA GCGACATAAT GGCGATGTGG TCGTGAAGAA GGCCACTGAC
AAAAAAGTCG TTAATAAAAA CGTCGTTGAT AAAAAAGTGC TGGTGAAAAA GAGTGTCGTT
CACCACTCCC CCGAGTATAA AACGGTTATA CAGAAGAACG TTGTACATGC ACCGTCGGTG
CACAAGCCAA TAGTAAAAAC ACGGGTGGTG TATAAAACCG GCGCGTTAGT GCGTAAAGCT
CCAGTAAACA GTATTGCTTT GCGCTTTGGT GGTGTGTCGT TTGTTTTTCA CGATGGCCTA
TATTATCGCC ATGTCAAGCA AGGTTATAAG GTGGTGCGTC CGCCCGTTGG ACTCAGGGTC
AATCATCTGC CTGCAGGGTA CGAGCGTATT GTTGTGAGGG GCAGTGCTTA CTATTTTGCT
CAAGGCATTT ATTATGTGTT TGATAATGGC GCTTACCGAG TGATTGACGA GCCTGCTTAC
TTGGGGGACG AATACGTCAC TGAAGATAAC TCAGTTGTGG CAAATTCGCT GGAATATCAG
CAATCGACCG CTAATAACAC AGGATATGAA TTGGGTAAGG CGTATGACTC GCTACCAAAA
GGTGCCGAGC CGGTTAGCAA AGATGGCCAG CAGTATTTTA AATATTACGA CATTTACTTT
TTGCCACAAT CATCAAACGC AGGTGTTCAC TATTTAGCCG TTAGACTCGA TTAA
 
Protein sequence
MNIKWLLPLV ISLSAVSPLS QAQYKNERHN GDVVVKKATD KKVVNKNVVD KKVLVKKSVV 
HHSPEYKTVI QKNVVHAPSV HKPIVKTRVV YKTGALVRKA PVNSIALRFG GVSFVFHDGL
YYRHVKQGYK VVRPPVGLRV NHLPAGYERI VVRGSAYYFA QGIYYVFDNG AYRVIDEPAY
LGDEYVTEDN SVVANSLEYQ QSTANNTGYE LGKAYDSLPK GAEPVSKDGQ QYFKYYDIYF
LPQSSNAGVH YLAVRLD