Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2600 |
Symbol | |
ID | 4174360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3161674 |
End bp | 3162447 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055621 |
Product | hypothetical protein |
Protein accession | YP_662169 |
Protein GI | 109898914 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.370975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATAA AATGGTTGTT ACCCTTGGTT ATTAGCTTAA GTGCTGTGTC TCCTCTAAGT CAGGCACAGT ATAAGAATGA GCGACATAAT GGCGATGTGG TCGTGAAGAA GGCCACTGAC AAAAAAGTCG TTAATAAAAA CGTCGTTGAT AAAAAAGTGC TGGTGAAAAA GAGTGTCGTT CACCACTCCC CCGAGTATAA AACGGTTATA CAGAAGAACG TTGTACATGC ACCGTCGGTG CACAAGCCAA TAGTAAAAAC ACGGGTGGTG TATAAAACCG GCGCGTTAGT GCGTAAAGCT CCAGTAAACA GTATTGCTTT GCGCTTTGGT GGTGTGTCGT TTGTTTTTCA CGATGGCCTA TATTATCGCC ATGTCAAGCA AGGTTATAAG GTGGTGCGTC CGCCCGTTGG ACTCAGGGTC AATCATCTGC CTGCAGGGTA CGAGCGTATT GTTGTGAGGG GCAGTGCTTA CTATTTTGCT CAAGGCATTT ATTATGTGTT TGATAATGGC GCTTACCGAG TGATTGACGA GCCTGCTTAC TTGGGGGACG AATACGTCAC TGAAGATAAC TCAGTTGTGG CAAATTCGCT GGAATATCAG CAATCGACCG CTAATAACAC AGGATATGAA TTGGGTAAGG CGTATGACTC GCTACCAAAA GGTGCCGAGC CGGTTAGCAA AGATGGCCAG CAGTATTTTA AATATTACGA CATTTACTTT TTGCCACAAT CATCAAACGC AGGTGTTCAC TATTTAGCCG TTAGACTCGA TTAA
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Protein sequence | MNIKWLLPLV ISLSAVSPLS QAQYKNERHN GDVVVKKATD KKVVNKNVVD KKVLVKKSVV HHSPEYKTVI QKNVVHAPSV HKPIVKTRVV YKTGALVRKA PVNSIALRFG GVSFVFHDGL YYRHVKQGYK VVRPPVGLRV NHLPAGYERI VVRGSAYYFA QGIYYVFDNG AYRVIDEPAY LGDEYVTEDN SVVANSLEYQ QSTANNTGYE LGKAYDSLPK GAEPVSKDGQ QYFKYYDIYF LPQSSNAGVH YLAVRLD
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