Gene Patl_2583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2583 
Symbol 
ID4174343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3130640 
End bp3131938 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content48% 
IMG OID638055604 
Producthypothetical protein 
Protein accessionYP_662152 
Protein GI109898897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTGTT GGTATCGCTC AAAGATTGTC GCCTATAGCG CGTTCATTTT GCTGGTTTCG 
TGTGGGGGCA TTAACTGCGT ATCGGCGCAG TCAGGCGTAC CTGAGCTGCC AGAATCATCC
GTTAGAATAA GCGGCTTTGG CACACTTGGC TTGACCCACA GCAGTGGGCC TGACGGGTGG
GGGTATCGGC GTGCAATTTC TCAGCCCCAA AATGATGGTG GAACGCGAGC AGACACCGAC
TCACGGTTAG GTGTTCAAAT GAACTACGCA CCTTCTGTGC AATTTGAGTT AGTCGGTCAG
TTAGTTGCCA CTCGTCGTTC TTCGTACGCC CCTTTGAGCG ACAGCATCGA ATGGGCATTT
GCAGCTTATC GACCTCAAAC AGATCTAACC TTTCGCATTG GACGGTTAAA CATAGACGCT
TTTTTGTTAG CAAATTACCG CAACGTGGGT TTTGCCTATC ATTTTGCCCG ACCGCCAGTG
GACTTTTATG CGTCGTTACC CCATACACTA GATGGCGCGG ACATCAGCAA AACGCTGCAA
TTTGATGACA GCCTATGGCG CTTTAAAGCC TATGGGGGAA AGTCTCGTAG TGGCGATTTG
TCTGAAAACG CGCGTGTTGC AGTGAAACCC GTTGTGGGTA TCACCACAAC CAGAGAAACA
AGTGAGTTAA CATTAAGAGC TGGGGTAGCG TATTCTGGCT TGTCAGACAA TCCCACTGTG
TTGAAACCTA TAATAACGGG TTTAGAAAGT ATCAGTGCCA TTGAAATACC CGAGGTAGCA
GAACAAGCAC GGCAATTACA AGCAAGGCTT GATAGCTCAA ACGCCCACGT CGTTTATTAC
ACACTTTCCG CACATTACGA GGTAAGTGAC TGGTTGTGGA CATTCGAAGT GACCAAGGTG
ACGGGTCACC CCTCTGCACA TATGACAAGT GGATATGCGG GTGCGGGTAA ACGCTTCGAT
GCGGTGACCC TGTTTGCCGG CGTTAGTTTA ATCTCAAGCC CAAATTTGCC TAACTTTACA
CCAGAGTGGT CATCCGCATT GACAGCTGTG TTAGGTGAGT CTGAAGCTGA GAAAATACAA
CGATTAGGTT CTGCAGCAGA GTTTGCAATC AATAAATCTG GTGCAAACCA ACAAAGTTAC
TCGGTTGGCG CGCGTTGGGA TTTTCATTCT AACATGGCGT TAAAAATACA GTGGGATCAT
ATTCAAATTG ATCATTACGG AGGAAGGTTG TGGGCTAATG CCACTATGGC GTCAGGGAAT
GCAAATGTAA CCACTGTCTT GCTTGATTTT ATATTTTGA
 
Protein sequence
MFCWYRSKIV AYSAFILLVS CGGINCVSAQ SGVPELPESS VRISGFGTLG LTHSSGPDGW 
GYRRAISQPQ NDGGTRADTD SRLGVQMNYA PSVQFELVGQ LVATRRSSYA PLSDSIEWAF
AAYRPQTDLT FRIGRLNIDA FLLANYRNVG FAYHFARPPV DFYASLPHTL DGADISKTLQ
FDDSLWRFKA YGGKSRSGDL SENARVAVKP VVGITTTRET SELTLRAGVA YSGLSDNPTV
LKPIITGLES ISAIEIPEVA EQARQLQARL DSSNAHVVYY TLSAHYEVSD WLWTFEVTKV
TGHPSAHMTS GYAGAGKRFD AVTLFAGVSL ISSPNLPNFT PEWSSALTAV LGESEAEKIQ
RLGSAAEFAI NKSGANQQSY SVGARWDFHS NMALKIQWDH IQIDHYGGRL WANATMASGN
ANVTTVLLDF IF