Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2569 |
Symbol | |
ID | 4174325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3114367 |
End bp | 3115008 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055587 |
Product | 50S ribosomal protein L25/general stress protein Ctc |
Protein accession | YP_662139 |
Protein GI | 109898884 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAG GAATTTTCAC TCTAGACGCA GAAGTCCGTA CTGATTTAGG GAAAGGTGCG AGCCGCCGCC TACGTCACGA AGACAAAGTA CCAGCTGTAT TATACGGCCT TGGTAAAGAA GCCGTTTCTT TAACTTTGTC ACATAACAAA GTTTTCCAAG CGCAAGAATT CGAAGCTTTT TACTCTCACG TTCTTACCTT GAATGTTGAC GGTAAAAAAG TTGAAGCCGT TATTAAAGAC ATGCAACGTC ACCCGTTCAA GCCTCGTGTA ACTCACTTGG ACTTTTTACG TGTTGATGCG AAGCAAGCTC TTCAAACAAA CGTACCTTTA CACTTCGTAA ACGAAGATAA AGCAGAATCT ATTAAAACTC ATGGTGGCCA CGCTGAGCAC CACATGGTTG ACGTAGAAAT TAGCTGTTTG CCAGCGGACT TGCCTGAGTT CATCGAAGTT GACGTGACTA ACGTTGAACT TGGTCAGACT CTTCACTTGT CAGACATCGC TCTTCCTGAA GGCGTAACGT CTGTTGAGCT TGCTAAAGGC GAAGATCACG ATCTAGCTGT TGTAACCGTT AAAACTGCTA AAGGCCCAAG CGTAGAATCT GAAGAAGATG ATGCCGAAGG TGAAGAAGCT GCTGCGGAAT AA
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Protein sequence | MSEGIFTLDA EVRTDLGKGA SRRLRHEDKV PAVLYGLGKE AVSLTLSHNK VFQAQEFEAF YSHVLTLNVD GKKVEAVIKD MQRHPFKPRV THLDFLRVDA KQALQTNVPL HFVNEDKAES IKTHGGHAEH HMVDVEISCL PADLPEFIEV DVTNVELGQT LHLSDIALPE GVTSVELAKG EDHDLAVVTV KTAKGPSVES EEDDAEGEEA AAE
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