| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2567 |
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| Symbol | |
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| ID | 4174323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3111946 |
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| End bp | 3112893 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055585 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_662137 |
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| Protein GI | 109898882 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCAGACA TGAAGCTTTT CGCTGGAAAC GCAGTACCTG AACTTGCACA GAAAGTAGCC
GACAGGCTGT ATACCAAACT TGGCCACGCC AGTGTTGGGC GCTTTAGCGA TGGGGAGATC
AGCGTAGAAG TACATGAAAA TGTGCGCGGC TCAGACGTTT TTATTATCCA ATCGACTTGT
GCACCTACCA ATGACAACTT AATGGAATTG ATTGTCATGA TTGATGCATT TCGTCGTGCT
TCGGCAGGCC GTATTACCGC TGTTATTCCT TACTTTGGTT ATGCTCGTCA AGACCGTCGT
GTACGTTCTG CCCGTGTACC AATTACTGCC AAGGTCGTTG CCGATTTCTT GTCAAACGTT
GGGGTTGACC GCGTATTGAC TATTGACTTA CACGCAGAGC AAATTCAAGG CTTCTTCGAT
GTGCCTGTTG ATAACGCCTT CGGTACACCG ATTTTGTTAG ATGACATGCG TCGTCGTAAC
ATTGAAAACC CAGTGGTTGT TTCTCCAGAT ATTGGCGGTG TTGTGCGTGC TCGTGCGGTA
GCAAAACTGC TAAACGACAC CGACCTTGCC ATTATCGATA AACGACGCCC TAAAGCGAAC
GTTGCTCAAG TTATGCACAT CATAGGTGAT GTACAAGATC GTGACTGCAT TATAGTTGAT
GACATGATTG ATACTGGTGG CACTTTAGCC AAAGCGGCAG AAGCCTTAAA GGCCCACGGA
GCTAAGAATG TTTTCGCTTA TGCTACCCAC GCTATTTTCT CGGGCAACGC GGCACAAAAC
CTGCGTGACT CTGTAATTGA TGAAATTATC ATCACTGACA GTATCCCCCT TAGCCCAGAA
ATAAAAGCCC TTGATAAAGT GAAGCAATTG ACCTTATCAA ACATGCTTGC TGAGGCCATT
CGCCGCGTGA GCAACGAAGA ATCAATCTCG GCGATGTTTG AATACTAA
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| Protein sequence | MPDMKLFAGN AVPELAQKVA DRLYTKLGHA SVGRFSDGEI SVEVHENVRG SDVFIIQSTC
APTNDNLMEL IVMIDAFRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSNV
GVDRVLTIDL HAEQIQGFFD VPVDNAFGTP ILLDDMRRRN IENPVVVSPD IGGVVRARAV
AKLLNDTDLA IIDKRRPKAN VAQVMHIIGD VQDRDCIIVD DMIDTGGTLA KAAEALKAHG
AKNVFAYATH AIFSGNAAQN LRDSVIDEII ITDSIPLSPE IKALDKVKQL TLSNMLAEAI
RRVSNEESIS AMFEY
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